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Taxonogenomic description of four new Clostridium species isolated from human gut: 'Clostridium amazonitimonense', 'Clostridium merdae', 'Clostridium massilidielmoense' and 'Clostridium nigeriense'.

ABSTRACT: Culturomics investigates microbial diversity of the human microbiome by combining diversified culture conditions, matrix-assisted laser desorption/ionization time-of-flight mass spectrometry and 16S rRNA gene identification. The present study allowed identification of four putative new Clostridium sensu stricto species: 'Clostridium amazonitimonense' strain LF2T, 'Clostridium massilidielmoense' strain MT26T, 'Clostridium nigeriense' strain Marseille-P2414T and 'Clostridium merdae' strain Marseille-P2953T, which we describe using the concept of taxonogenomics. We describe the main characteristics of each bacterium and present their complete genome sequence and annotation.

SUBMITTER: Alou MT 

PROVIDER: S-EPMC5767839 | biostudies-literature | 2018 Jan

REPOSITORIES: biostudies-literature

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Taxonogenomic description of four new <i>Clostridium</i> species isolated from human gut: <i>'Clostridium amazonitimonense'</i>, <i>'Clostridium merdae'</i>, <i>'Clostridium massilidielmoense'</i> and <i>'Clostridium nigeriense'</i>.

Alou M T MT   Ndongo S S   Frégère L L   Labas N N   Andrieu C C   Richez M M   Couderc C C   Baudoin J-P JP   Abrahão J J   Brah S S   Diallo A A   Sokhna C C   Cassir N N   La Scola B B   Cadoret F F   Raoult D D  

New microbes and new infections 20171122

Culturomics investigates microbial diversity of the human microbiome by combining diversified culture conditions, matrix-assisted laser desorption/ionization time-of-flight mass spectrometry and 16S rRNA gene identification. The present study allowed identification of four putative new <i>Clostridium sensu stricto</i> species: <i>'Clostridium amazonitimonense'</i> strain LF2<sup>T</sup>, <i>'Clostridium massilidielmoense'</i> strain MT26<sup>T</sup>, <i>'Clostridium nigeriense'</i> strain Marsei  ...[more]

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