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Association between the PINX1 and NAT2 polymorphisms and serum lipid levels.


ABSTRACT: Jing nationality is a relatively conservative and isolated minority in China. Little is known about the association of the PIN2/TERF1-interacting telomerase inhibitor 1 (PINX1) and N-acetyltransferase 2 (NAT2) single nucleotide polymorphisms (SNPs) and serum lipid levels in the Chinese populations. This study aimed to clarify the association of 6 SNPs of the PINX1 and NAT2 and serum lipid levels in two Chinese populations. Genotyping of the SNPs was performed in 1236 Han subjects and 1248 Jing participants. Allelic and genotypic frequencies of these variants (except NAT2 rs1799931) were different between the two ethnic groups. The minor allele carriers had higher triglyceride (TG, rs11776767, rs1495743 and rs1799930), low-density lipoprotein cholesterol (rs6601530) levels and the apolipoprotein (Apo)A1/ApoB ratio (rs1495743) in Han nationality; and higher total cholesterol (rs1961456), TG (rs11776767, rs6601530 and rs1495743) and lower ApoA1 (rs6601530 and rs1799931) levels in Jing minority than the minor allele non-carriers. The SNPs were not statistically independent by the multiple-locus linkage disequilibrium analyses. The integrative haplotypes and gene-by-gene (G × G) interactions on serum lipid traits were also observed in the two populations. Association analysis based on haplotypes and G × G interactions might be powerful than single-locus tests. Differences in serum lipid profiles between the two populations might partially be attributed to these SNPs, their haplotypes and G × G interactions.

SUBMITTER: Zhang QH 

PROVIDER: S-EPMC5768388 | biostudies-literature | 2017 Dec

REPOSITORIES: biostudies-literature

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Association between the <i>PINX1</i> and <i>NAT2</i> polymorphisms and serum lipid levels.

Zhang Qing-Hui QH   Yin Rui-Xing RX   Huang Feng F   Yang De-Zhai DZ   Lin Wei-Xiong WX   Pan Shang-Ling SL  

Oncotarget 20171209 69


Jing nationality is a relatively conservative and isolated minority in China. Little is known about the association of the PIN2/TERF1-interacting telomerase inhibitor 1 (<i>PINX1</i>) and N-acetyltransferase 2 (<i>NAT2</i>) single nucleotide polymorphisms (SNPs) and serum lipid levels in the Chinese populations. This study aimed to clarify the association of 6 SNPs of the <i>PINX1</i> and <i>NAT2</i> and serum lipid levels in two Chinese populations. Genotyping of the SNPs was performed in 1236  ...[more]

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