Unknown

Dataset Information

0

Computational Modeling of the Staphylococcal Enterotoxins and Their Interaction with Natural Antitoxin Compounds


ABSTRACT: Staphylococcus aureus is an opportunistic bacterium that produces various types of toxins, resulting in serious food poisoning. Staphylococcal enterotoxins (SEs) are heat-stable and resistant to hydrolysis by digestive enzymes, representing a potential hazard for consumers worldwide. In the present study, we used amino-acid sequences encoding SEA and SEB-like to identify their respective template structure and build the three-dimensional (3-D) models using homology modeling method. Two natural compounds, Betulin and 28-Norolean-12-en-3-one, were selected for docking study on the basis of the criteria that they satisfied the Lipinski's Rule-of-Five. A total of 14 and 13 amino-acid residues were present in the best binding site predicted in the SEA and SEB-like, respectively, using the Computer Atlas of Surface Topology of Proteins (CASTp). Among these residues, the docking study with natural compounds Betulin and 28-Norolean-12-en-3-one revealed that GLN43 and GLY227 in the binding site of the SEA, each formed a hydrogen-bond interaction with 28-Norolean-12-en-3-one; while GLY227 residue established a hydrogen bond with Betulin. In the case of SEB-like, the docking study demonstrated that ASN87 and TYR88 residues in its binding site formed hydrogen bonds with Betulin; whereas HIS59 in the binding site formed a hydrogen-bond interaction with 28-Norolean-12-en-3-one. Our results demonstrate that the toxic effects of these two SEs can be effectively treated with antitoxins like Betulin and 28-Norolean-12-en-3-one, which could provide an effective drug therapy for this pathogen.

SUBMITTER: Kurjogi M 

PROVIDER: S-EPMC5796082 | biostudies-literature | 2018 Jan

REPOSITORIES: biostudies-literature

altmetric image

Publications

Computational Modeling of the Staphylococcal Enterotoxins and Their Interaction with Natural Antitoxin Compounds

Kurjogi Mahantesh M   Satapute Praveen P   Jogaiah Sudisha S   Abdelrahman Mostafa M   Daddam Jayasimha Rayalu JR   Ramu Venkatesh V   Tran Lam-Son Phan LP  

International journal of molecular sciences 20180103 1


<i>Staphylococcus aureus</i> is an opportunistic bacterium that produces various types of toxins, resulting in serious food poisoning. Staphylococcal enterotoxins (SEs) are heat-stable and resistant to hydrolysis by digestive enzymes, representing a potential hazard for consumers worldwide. In the present study, we used amino-acid sequences encoding SEA and SEB-like to identify their respective template structure and build the three-dimensional (3-D) models using homology modeling method. Two na  ...[more]

Similar Datasets

| S-EPMC3842302 | biostudies-literature
| S-EPMC85251 | biostudies-literature
| S-EPMC4867771 | biostudies-literature
| S-EPMC281152 | biostudies-other
| PRJEB36994 | ENA
| PRJEB36867 | ENA
| S-EPMC4379538 | biostudies-literature
| S-EPMC5411912 | biostudies-literature
| S-EPMC6146041 | biostudies-literature
| S-EPMC2573384 | biostudies-literature