Unknown

Dataset Information

0

Penetrance of Polygenic Obesity Susceptibility Loci across the Body Mass Index Distribution.


ABSTRACT: A growing number of single-nucleotide polymorphisms (SNPs) have been associated with body mass index (BMI) and obesity, but whether the effects of these obesity-susceptibility loci are uniform across the BMI distribution remains unclear. We studied the effects of 37 BMI-associated SNPs in 75,230 adults of European ancestry across BMI percentiles by using conditional quantile regression (CQR) and meta-regression (MR) models. The effects of nine SNPs (24%)-rs1421085 (FTO; p = 8.69 × 10-15), rs6235 (PCSK1; p = 7.11 × 10-6), rs7903146 (TCF7L2; p = 9.60 × 10-6), rs11873305 (MC4R; p = 5.08 × 10-5), rs12617233 (FANCL; p = 5.30 × 10-5), rs11672660 (GIPR; p = 1.64 × 10-4), rs997295 (MAP2K5; p = 3.25 × 10-4), rs6499653 (FTO; p = 6.23 × 10-4), and rs3824755 (NT5C2; p = 7.90 × 10-4)-increased significantly across the sample BMI distribution. We showed that such increases stemmed from unadjusted gene interactions that enhanced the effects of SNPs in persons with a high BMI. When 125 height-associated SNPs were analyzed for comparison, only one (<1%), rs6219 (IGF1, p = 1.80 × 10-4), showed effects that varied significantly across height percentiles. Cumulative gene scores of these SNPs (GS-BMI and GS-height) showed that only GS-BMI had effects that increased significantly across the sample distribution (BMI: p = 7.03 × 10-37; height: p = 0.499). Overall, these findings underscore the importance of gene-gene and gene-environment interactions in shaping the genetic architecture of BMI and advance a method for detecting such interactions by using only the sample outcome distribution.

SUBMITTER: Abadi A 

PROVIDER: S-EPMC5812888 | biostudies-literature | 2017 Dec

REPOSITORIES: biostudies-literature

altmetric image

Publications

Penetrance of Polygenic Obesity Susceptibility Loci across the Body Mass Index Distribution.

Abadi Arkan A   Alyass Akram A   Robiou du Pont Sebastien S   Bolker Ben B   Singh Pardeep P   Mohan Viswanathan V   Diaz Rafael R   Engert James C JC   Yusuf Salim S   Gerstein Hertzel C HC   Anand Sonia S SS   Meyre David D  

American journal of human genetics 20171201 6


A growing number of single-nucleotide polymorphisms (SNPs) have been associated with body mass index (BMI) and obesity, but whether the effects of these obesity-susceptibility loci are uniform across the BMI distribution remains unclear. We studied the effects of 37 BMI-associated SNPs in 75,230 adults of European ancestry across BMI percentiles by using conditional quantile regression (CQR) and meta-regression (MR) models. The effects of nine SNPs (24%)-rs1421085 (FTO; p = 8.69 × 10<sup>-15</su  ...[more]

Similar Datasets

| S-EPMC4854022 | biostudies-literature
| S-EPMC5899233 | biostudies-literature
| S-EPMC4490293 | biostudies-literature
| S-EPMC7808627 | biostudies-literature
| S-EPMC10788293 | biostudies-literature
| S-EPMC7943191 | biostudies-literature
| S-EPMC9615027 | biostudies-literature
| S-EPMC7117956 | biostudies-literature
| S-EPMC3842899 | biostudies-other
| S-EPMC3661695 | biostudies-literature