Dataset Information
PESTO: Parameter EStimation TOolbox.
Ontology highlight
ABSTRACT: Summary
PESTO is a widely applicable and highly customizable toolbox for parameter estimation in MathWorks MATLAB. It offers scalable algorithms for optimization, uncertainty and identifiability analysis, which work in a very generic manner, treating the objective function as a black box. Hence, PESTO can be used for any parameter estimation problem, for which the user can provide a deterministic objective function in MATLAB.Availability and implementation
PESTO is a MATLAB toolbox, freely available under the BSD license. The source code, along with extensive documentation and example code, can be downloaded from https://github.com/ICB-DCM/PESTO/.Contact
jan.hasenauer@helmholtz-muenchen.de.Supplementary information
Supplementary data are available at Bioinformatics online.
SUBMITTER: Stapor P
PROVIDER: S-EPMC5860618 | biostudies-literature | 2018 Feb
REPOSITORIES: biostudies-literature
Publications
PESTO: Parameter EStimation TOolbox.
Bioinformatics (Oxford, England) 20180201 4
<h4>Summary</h4>PESTO is a widely applicable and highly customizable toolbox for parameter estimation in MathWorks MATLAB. It offers scalable algorithms for optimization, uncertainty and identifiability analysis, which work in a very generic manner, treating the objective function as a black box. Hence, PESTO can be used for any parameter estimation problem, for which the user can provide a deterministic objective function in MATLAB.<h4>Availability and implementation</h4>PESTO is a MATLAB toolb ...[more]