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Multimodal mechanistic signatures for neurodegenerative diseases (NeuroMMSig): a web server for mechanism enrichment.


ABSTRACT:

Motivation

The concept of a 'mechanism-based taxonomy of human disease' is currently replacing the outdated paradigm of diseases classified by clinical appearance. We have tackled the paradigm of mechanism-based patient subgroup identification in the challenging area of research on neurodegenerative diseases.

Results

We have developed a knowledge base representing essential pathophysiology mechanisms of neurodegenerative diseases. Together with dedicated algorithms, this knowledge base forms the basis for a 'mechanism-enrichment server' that supports the mechanistic interpretation of multiscale, multimodal clinical data.

Availability and implementation

NeuroMMSig is available at http://neurommsig.scai.fraunhofer.de/.

Contact

martin.hofmann-apitius@scai.fraunhofer.de.

Supplementary information

Supplementary data are available at Bioinformatics online.

SUBMITTER: Domingo-Fernandez D 

PROVIDER: S-EPMC5870765 | biostudies-literature | 2017 Nov

REPOSITORIES: biostudies-literature

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Publications

Multimodal mechanistic signatures for neurodegenerative diseases (NeuroMMSig): a web server for mechanism enrichment.

Domingo-Fernández Daniel D   Kodamullil Alpha Tom AT   Iyappan Anandhi A   Naz Mufassra M   Emon Mohammad Asif MA   Raschka Tamara T   Karki Reagon R   Springstubbe Stephan S   Ebeling Christian C   Hofmann-Apitius Martin M  

Bioinformatics (Oxford, England) 20171101 22


<h4>Motivation</h4>The concept of a 'mechanism-based taxonomy of human disease' is currently replacing the outdated paradigm of diseases classified by clinical appearance. We have tackled the paradigm of mechanism-based patient subgroup identification in the challenging area of research on neurodegenerative diseases.<h4>Results</h4>We have developed a knowledge base representing essential pathophysiology mechanisms of neurodegenerative diseases. Together with dedicated algorithms, this knowledge  ...[more]

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