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Identification of a novel locus on chromosome 2q13, which predisposes to clinical vertebral fractures independently of bone density.


ABSTRACT: OBJECTIVES:To identify genetic determinants of susceptibility to clinical vertebral fractures, which is an important complication of osteoporosis. METHODS:Here we conduct a genome-wide association study in 1553 postmenopausal women with clinical vertebral fractures and 4340 controls, with a two-stage replication involving 1028 cases and 3762 controls. Potentially causal variants were identified using expression quantitative trait loci (eQTL) data from transiliac bone biopsies and bioinformatic studies. RESULTS:A locus tagged by rs10190845 was identified on chromosome 2q13, which was significantly associated with clinical vertebral fracture (P=1.04×10-9) with a large effect size (OR 1.74, 95%?CI 1.06 to 2.6). Bioinformatic analysis of this locus identified several potentially functional SNPs that are associated with expression of the positional candidate genes TTL (tubulin tyrosine ligase) and SLC20A1 (solute carrier family 20 member 1). Three other suggestive loci were identified on chromosomes 1p31, 11q12 and 15q11. All these loci were novel and had not previously been associated with bone mineral density or clinical fractures. CONCLUSION:We have identified a novel genetic variant that is associated with clinical vertebral fractures by mechanisms that are independent of BMD. Further studies are now in progress to validate this association and evaluate the underlying mechanism.

SUBMITTER: Alonso N 

PROVIDER: S-EPMC5912156 | biostudies-literature | 2018 Mar

REPOSITORIES: biostudies-literature

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Identification of a novel locus on chromosome 2q13, which predisposes to clinical vertebral fractures independently of bone density.

Alonso Nerea N   Estrada Karol K   Albagha Omar M E OME   Herrera Lizbeth L   Reppe Sjur S   Olstad Ole K OK   Gautvik Kaare M KM   Ryan Niamh M NM   Evans Kathryn L KL   Nielson Carrie M CM   Hsu Yi-Hsiang YH   Kiel Douglas P DP   Markozannes George G   Ntzani Evangelia E EE   Evangelou Evangelos E   Feenstra Bjarke B   Liu Xueping X   Melbye Mads M   Masi Laura L   Brandi Maria Luisa ML   Riches Philip P   Daroszewska Anna A   Olmos José Manuel JM   Valero Carmen C   Castillo Jesús J   Riancho José A JA   Husted Lise B LB   Langdahl Bente L BL   Brown Matthew A MA   Duncan Emma L EL   Kaptoge Stephen S   Khaw Kay-Tee KT   Usategui-Martín Ricardo R   Del Pino-Montes Javier J   González-Sarmiento Rogelio R   Lewis Joshua R JR   Prince Richard L RL   D'Amelio Patrizia P   García-Giralt Natalia N   Nogués Xavier X   Nogués Xavier X   Mencej-Bedrac Simona S   Marc Janja J   Wolstein Orit O   Eisman John A JA   Oei Ling L   Medina-Gómez Carolina C   Schraut Katharina E KE   Navarro Pau P   Wilson James F JF   Davies Gail G   Starr John J   Deary Ian I   Tanaka Toshiko T   Ferrucci Luigi L   Gianfrancesco Fernando F   Gennari Luigi L   Lucas Gavin G   Elosua Roberto R   Uitterlinden André G AG   Rivadeneira Fernando F   Ralston Stuart H SH  

Annals of the rheumatic diseases 20171123 3


<h4>Objectives</h4>To identify genetic determinants of susceptibility to clinical vertebral fractures, which is an important complication of osteoporosis.<h4>Methods</h4>Here we conduct a genome-wide association study in 1553 postmenopausal women with clinical vertebral fractures and 4340 controls, with a two-stage replication involving 1028 cases and 3762 controls. Potentially causal variants were identified using expression quantitative trait loci (eQTL) data from transiliac bone biopsies and  ...[more]

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