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Phenotypic and molecular characterization of Klebsiella spp. isolates causing community-acquired infections.


ABSTRACT: Klebsiella spp. isolates from community-acquired infections were characterized. A total of 39 Klebsiella spp. isolates were obtained from outpatients at four rural hospitals in Mexico (2013-2014). The biochemical tests identified all as being K. pneumoniae. The molecular multiplex-PCR test identified 36 (92.4%) K. pneumoniae isolates and one (2.5%) K. variicola isolate, and phylogenetic analysis of the rpoB gene identified two isolates (5.1%) belonging to K. quasipneumoniae subsp. quasipneumoniae and K. quasivariicola. The last one was confirmed by phylogenetic analysis of six-loci concatenated genes. Mostly the isolates were multidrug resistant; however, a minority were extended-spectrum β-lactamase producing (10.2%). The extended-spectrum β-lactamase CTX-M-15 gene was identified in these isolates. Analysis of biofilm production and the hypermucoviscosity phenotype showed a total of 35 (92.3%) and seven (17.9%) of the isolates were positive for these phenotypes respectively. The K2 (4/39, 10.2%), K5 (2/39, 5.1%) and K54 (1/39, 2.5%) serotypes were identified in seven (17.9%) of the isolates, and only 28.5% (2/7) hypermucoviscous isolates were positive for the K2 and K5 serotypes. In general, the sequence type (ST) analysis and phylogenetic analysis of seven multilocus sequence typing loci were heterogeneous; however, ST29 was the most prevalent ST in the analysed isolates, accounting for 19% (4/21) of the total isolates. Two of the four ST29 isolates had the hypermucoviscosity phenotype. The virulence factors for fimbriae were the most prevalent, followed by siderophores. Community-acquired infections are caused by various species from Klebsiella genus, with different profiles of antibiotic resistance and heterogeneous virulence factors.

SUBMITTER: Garza-Ramos U 

PROVIDER: S-EPMC5913063 | biostudies-literature | 2018 May

REPOSITORIES: biostudies-literature

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Phenotypic and molecular characterization of <i>Klebsiella</i> spp. isolates causing community-acquired infections.

Garza-Ramos U U   Barrios-Camacho H H   Moreno-Domínguez S S   Toribio-Jiménez J J   Jardón-Pineda D D   Cuevas-Peña J J   Sánchez-Pérez A A   Duran-Bedolla J J   Olguín-Rodriguez J J   Román-Román A A  

New microbes and new infections 20180217


<i>Klebsiella</i> spp. isolates from community-acquired infections were characterized. A total of 39 <i>Klebsiella</i> spp. isolates were obtained from outpatients at four rural hospitals in Mexico (2013-2014). The biochemical tests identified all as being <i>K. pneumoniae</i>. The molecular multiplex-PCR test identified 36 (92.4%) <i>K. pneumoniae</i> isolates and one (2.5%) <i>K. variicola</i> isolate, and phylogenetic analysis of the <i>rpoB</i> gene identified two isolates (5.1%) belonging t  ...[more]

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