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Common schizophrenia alleles are enriched in mutation-intolerant genes and in regions under strong background selection.


ABSTRACT: Schizophrenia is a debilitating psychiatric condition often associated with poor quality of life and decreased life expectancy. Lack of progress in improving treatment outcomes has been attributed to limited knowledge of the underlying biology, although large-scale genomic studies have begun to provide insights. We report a new genome-wide association study of schizophrenia (11,260 cases and 24,542 controls), and through meta-analysis with existing data we identify 50 novel associated loci and 145 loci in total. Through integrating genomic fine-mapping with brain expression and chromosome conformation data, we identify candidate causal genes within 33 loci. We also show for the first time that the common variant association signal is highly enriched among genes that are under strong selective pressures. These findings provide new insights into the biology and genetic architecture of schizophrenia, highlight the importance of mutation-intolerant genes and suggest a mechanism by which common risk variants persist in the population.

SUBMITTER: Pardinas AF 

PROVIDER: S-EPMC5918692 | biostudies-literature | 2018 Mar

REPOSITORIES: biostudies-literature

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Common schizophrenia alleles are enriched in mutation-intolerant genes and in regions under strong background selection.

Pardiñas Antonio F AF   Holmans Peter P   Pocklington Andrew J AJ   Escott-Price Valentina V   Ripke Stephan S   Carrera Noa N   Legge Sophie E SE   Bishop Sophie S   Cameron Darren D   Hamshere Marian L ML   Han Jun J   Hubbard Leon L   Lynham Amy A   Mantripragada Kiran K   Rees Elliott E   MacCabe James H JH   McCarroll Steven A SA   Baune Bernhard T BT   Breen Gerome G   Byrne Enda M EM   Dannlowski Udo U   Eley Thalia C TC   Hayward Caroline C   Martin Nicholas G NG   McIntosh Andrew M AM   Plomin Robert R   Porteous David J DJ   Wray Naomi R NR   Caballero Armando A   Geschwind Daniel H DH   Huckins Laura M LM   Ruderfer Douglas M DM   Santiago Enrique E   Sklar Pamela P   Stahl Eli A EA   Won Hyejung H   Agerbo Esben E   Als Thomas D TD   Andreassen Ole A OA   Bækvad-Hansen Marie M   Mortensen Preben Bo PB   Pedersen Carsten Bøcker CB   Børglum Anders D AD   Bybjerg-Grauholm Jonas J   Djurovic Srdjan S   Durmishi Naser N   Pedersen Marianne Giørtz MG   Golimbet Vera V   Grove Jakob J   Hougaard David M DM   Mattheisen Manuel M   Molden Espen E   Mors Ole O   Nordentoft Merete M   Pejovic-Milovancevic Milica M   Sigurdsson Engilbert E   Silagadze Teimuraz T   Hansen Christine Søholm CS   Stefansson Kari K   Stefansson Hreinn H   Steinberg Stacy S   Tosato Sarah S   Werge Thomas T   Collier David A DA   Rujescu Dan D   Kirov George G   Owen Michael J MJ   O'Donovan Michael C MC   Walters James T R JTR  

Nature genetics 20180226 3


Schizophrenia is a debilitating psychiatric condition often associated with poor quality of life and decreased life expectancy. Lack of progress in improving treatment outcomes has been attributed to limited knowledge of the underlying biology, although large-scale genomic studies have begun to provide insights. We report a new genome-wide association study of schizophrenia (11,260 cases and 24,542 controls), and through meta-analysis with existing data we identify 50 novel associated loci and 1  ...[more]

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