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A blueprint for human whole-cell modeling.


ABSTRACT: Whole-cell dynamical models of human cells are a central goal of systems biology. Such models could help researchers understand cell biology and help physicians treat disease. Despite significant challenges, we believe that human whole-cell models are rapidly becoming feasible. To develop a plan for achieving human whole-cell models, we analyzed the existing models of individual cellular pathways, surveyed the biomodeling community, and reflected on our experience developing whole-cell models of bacteria. Based on these analyses, we propose a plan for a project, termed the Human Whole-Cell Modeling Project, to achieve human whole-cell models. The foundations of the plan include technology development, standards development, and interdisciplinary collaboration.

SUBMITTER: Szigeti B 

PROVIDER: S-EPMC5966287 | biostudies-literature | 2018 Feb

REPOSITORIES: biostudies-literature

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A blueprint for human whole-cell modeling.

Szigeti Balázs B   Roth Yosef D YD   Sekar John A P JAP   Goldberg Arthur P AP   Pochiraju Saahith C SC   Karr Jonathan R JR  

Current opinion in systems biology 20171109


Whole-cell dynamical models of human cells are a central goal of systems biology. Such models could help researchers understand cell biology and help physicians treat disease. Despite significant challenges, we believe that human whole-cell models are rapidly becoming feasible. To develop a plan for achieving human whole-cell models, we analyzed the existing models of individual cellular pathways, surveyed the biomodeling community, and reflected on our experience developing whole-cell models of  ...[more]

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