A Novel Strategy for Detecting Recent Horizontal Gene Transfer and Its Application to Rhizobium Strains.
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ABSTRACT:
SUBMITTER: Li X
PROVIDER: S-EPMC5968381 | biostudies-literature | 2018
REPOSITORIES: biostudies-literature
Publications
A Novel Strategy for Detecting Recent Horizontal Gene Transfer and Its Application to <i>Rhizobium</i> Strains.
Li Xiangchen X Tong Wenjun W Wang Lina L Rahman Siddiq Ur SU Wei Gehong G Tao Shiheng S
Frontiers in microbiology 20180515
Recent horizontal gene transfer (HGT) is crucial for enabling microbes to rapidly adapt to their novel environments without relying upon rare beneficial mutations that arise spontaneously. For several years now, computational approaches have been developed to detect HGT, but they typically lack the sensitivity and ability to detect recent HGT events. Here we introduce a novel strategy, named <i>RecentHGT</i>. The number of genes undergoing recent HGT between two bacterial genomes was estimated b ...[more]
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