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New insights into the genetics of primary open-angle glaucoma based on meta-analyses of intraocular pressure and optic disc characteristics.


ABSTRACT: Primary open-angle glaucoma (POAG), the most common optic neuropathy, is a heritable disease. Siblings of POAG cases have a ten-fold increased risk of developing the disease. Intraocular pressure (IOP) and optic nerve head characteristics are used clinically to predict POAG risk. We conducted a genome-wide association meta-analysis of IOP and optic disc parameters and validated our findings in multiple sets of POAG cases and controls. Using imputation to the 1000 genomes (1000G) reference set, we identified 9 new genomic regions associated with vertical cup-disc ratio (VCDR) and 1 new region associated with IOP. Additionally, we found 5 novel loci for optic nerve cup area and 6 for disc area. Previously it was assumed that genetic variation influenced POAG either through IOP or via changes to the optic nerve head; here we present evidence that some genomic regions affect both IOP and the disc parameters. We characterized the effect of the novel loci through pathway analysis and found that pathways involved are not entirely distinct as assumed so far. Further, we identified a novel association between CDKN1A and POAG. Using a zebrafish model we show that six6b (associated with POAG and optic nerve head variation) alters the expression of cdkn1a. In summary, we have identified several novel genes influencing the major clinical risk predictors of POAG and showed that genetic variation in CDKN1A is important in POAG risk.

SUBMITTER: Springelkamp H 

PROVIDER: S-EPMC5968632 | biostudies-literature | 2017 Jan

REPOSITORIES: biostudies-literature

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New insights into the genetics of primary open-angle glaucoma based on meta-analyses of intraocular pressure and optic disc characteristics.

Springelkamp Henriët H   Iglesias Adriana I AI   Mishra Aniket A   Höhn René R   Wojciechowski Robert R   Khawaja Anthony P AP   Nag Abhishek A   Wang Ya Xing YX   Wang Jie Jin JJ   Cuellar-Partida Gabriel G   Gibson Jane J   Bailey Jessica N Cooke JN   Vithana Eranga N EN   Gharahkhani Puya P   Boutin Thibaud T   Ramdas Wishal D WD   Zeller Tanja T   Luben Robert N RN   Yonova-Doing Ekaterina E   Viswanathan Ananth C AC   Yazar Seyhan S   Cree Angela J AJ   Haines Jonathan L JL   Koh Jia Yu JY   Souzeau Emmanuelle E   Wilson James F JF   Amin Najaf N   Müller Christian C   Venturini Cristina C   Kearns Lisa S LS   Kang Jae Hee JH   Tham Yih Chung YC   Zhou Tiger T   van Leeuwen Elisabeth M EM   Nickels Stefan S   Sanfilippo Paul P   Liao Jiemin J   van der Linde Herma H   Zhao Wanting W   van Koolwijk Leonieke M E LM   Zheng Li L   Rivadeneira Fernando F   Baskaran Mani M   van der Lee Sven J SJ   Perera Shamira S   de Jong Paulus T V M PT   Oostra Ben A BA   Uitterlinden André G AG   Fan Qiao Q   Hofman Albert A   Tai E-Shyong ES   Vingerling Johannes R JR   Sim Xueling X   Wolfs Roger C W RC   Teo Yik Ying YY   Lemij Hans G HG   Khor Chiea Chuen CC   Willemsen Rob R   Lackner Karl J KJ   Aung Tin T   Jansonius Nomdo M NM   Montgomery Grant G   Wild Philipp S PS   Young Terri L TL   Burdon Kathryn P KP   Hysi Pirro G PG   Pasquale Louis R LR   Wong Tien Yin TY   Klaver Caroline C W CC   Hewitt Alex W AW   Jonas Jost B JB   Mitchell Paul P   Lotery Andrew J AJ   Foster Paul J PJ   Vitart Veronique V   Pfeiffer Norbert N   Craig Jamie E JE   Mackey David A DA   Hammond Christopher J CJ   Wiggs Janey L JL   Cheng Ching-Yu CY   van Duijn Cornelia M CM   MacGregor Stuart S  

Human molecular genetics 20170101 2


Primary open-angle glaucoma (POAG), the most common optic neuropathy, is a heritable disease. Siblings of POAG cases have a ten-fold increased risk of developing the disease. Intraocular pressure (IOP) and optic nerve head characteristics are used clinically to predict POAG risk. We conducted a genome-wide association meta-analysis of IOP and optic disc parameters and validated our findings in multiple sets of POAG cases and controls. Using imputation to the 1000 genomes (1000G) reference set, w  ...[more]

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