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Time-evolving genetic networks reveal a NAC troika that negatively regulates leaf senescence in Arabidopsis.


ABSTRACT: Senescence is controlled by time-evolving networks that describe the temporal transition of interactions among senescence regulators. Here, we present time-evolving networks for NAM/ATAF/CUC (NAC) transcription factors in Arabidopsis during leaf aging. The most evident characteristic of these time-dependent networks was a shift from positive to negative regulation among NACs at a presenescent stage. ANAC017, ANAC082, and ANAC090, referred to as a "NAC troika," govern the positive-to-negative regulatory shift. Knockout of the NAC troika accelerated senescence and the induction of other NACs, whereas overexpression of the NAC troika had the opposite effects. Transcriptome and molecular analyses revealed shared suppression of senescence-promoting processes by the NAC troika, including salicylic acid (SA) and reactive oxygen species (ROS) responses, but with predominant regulation of SA and ROS responses by ANAC090 and ANAC017, respectively. Our time-evolving networks provide a unique regulatory module of presenescent repressors that direct the timely induction of senescence-promoting processes at the presenescent stage of leaf aging.

SUBMITTER: Kim HJ 

PROVIDER: S-EPMC6003463 | biostudies-literature | 2018 May

REPOSITORIES: biostudies-literature

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Time-evolving genetic networks reveal a NAC troika that negatively regulates leaf senescence in <i>Arabidopsis</i>.

Kim Hyo Jung HJ   Park Ji-Hwan JH   Kim Jingil J   Kim Jung Ju JJ   Hong Sunghyun S   Kim Jeongsik J   Kim Jin Hee JH   Woo Hye Ryun HR   Hyeon Changbong C   Lim Pyung Ok PO   Nam Hong Gil HG   Hwang Daehee D  

Proceedings of the National Academy of Sciences of the United States of America 20180507 21


Senescence is controlled by time-evolving networks that describe the temporal transition of interactions among senescence regulators. Here, we present time-evolving networks for NAM/ATAF/CUC (NAC) transcription factors in <i>Arabidopsis</i> during leaf aging. The most evident characteristic of these time-dependent networks was a shift from positive to negative regulation among NACs at a presenescent stage. ANAC017, ANAC082, and ANAC090, referred to as a "NAC troika," govern the positive-to-negat  ...[more]

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2019-10-18 | GSE132740 | GEO