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FunImageJ: a Lisp framework for scientific image processing.

ABSTRACT:

Summary

FunImageJ is a Lisp framework for scientific image processing built upon the ImageJ software ecosystem. The framework provides a natural functional-style for programming, while accounting for the performance requirements necessary in big data processing commonly encountered in biological image analysis.

Availability and implementation

Freely available plugin to Fiji (http://fiji.sc/#download). Installation and use instructions available at http://imagej.net/FunImageJ.

Contact

kharrington@uidaho.edu.

Supplementary information

Supplementary data are available at Bioinformatics online.

SUBMITTER: Harrington KIS

PROVIDER: S-EPMC6031065 | biostudies-literature | 2018 Mar

REPOSITORIES: biostudies-literature

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Publications

FunImageJ: a Lisp framework for scientific image processing.

Harrington Kyle I S KIS Rueden Curtis T CT Eliceiri Kevin W KW

Bioinformatics (Oxford, England) 20180301 5

<h4>Summary</h4>FunImageJ is a Lisp framework for scientific image processing built upon the ImageJ software ecosystem. The framework provides a natural functional-style for programming, while accounting for the performance requirements necessary in big data processing commonly encountered in biological image analysis.<h4>Availability and implementation</h4>Freely available plugin to Fiji (http://fiji.sc/#download). Installation and use instructions available at http://imagej.net/FunImageJ.<h4>C ...[more]

PMID: 29106446

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