Unknown

Dataset Information

0

The Caenorhabditis elegans Ortholog of TDP-43 Regulates the Chromatin Localization of the Heterochromatin Protein 1 Homolog HPL-2.


ABSTRACT: TDP-1 is the Caenorhabditis elegans ortholog of mammalian TDP-43, which is strongly implicated in the etiology of frontotemporal dementia (FTD) and amyotrophic lateral sclerosis (ALS). We discovered that deletion of the tdp-1 gene results in enhanced nuclear RNA interference (RNAi). As nuclear RNAi in C. elegans involves chromatin changes moderated by HPL-2, a homolog of heterochromatin protein 1 (HP1), we investigated the interaction of TDP-1 and HPL-2. We found that TDP-1 and HPL-2 interact directly and that loss of TDP-1 dramatically alters the chromatin association of HPL-2. We showed previously that deletion of the tdp-1 gene results in transcriptional alterations and the accumulation of double-stranded RNA (dsRNA). These molecular changes are replicated in an hpl-2 deletion strain, consistent with HPL-2 acting in consort with TDP-1 to modulate these aspects of RNA metabolism. Our observations identify novel mechanisms by which HP1 homologs can be recruited to chromatin and by which nuclear depletion of human TDP-43 may lead to changes in RNA metabolism that are relevant to disease.

SUBMITTER: Saldi TK 

PROVIDER: S-EPMC6048318 | biostudies-literature | 2018 Aug

REPOSITORIES: biostudies-literature

altmetric image

Publications

The Caenorhabditis elegans Ortholog of TDP-43 Regulates the Chromatin Localization of the Heterochromatin Protein 1 Homolog HPL-2.

Saldi Tassa K TK   Gonzales Patrick P   Garrido-Lecca Alfonso A   Dostal Vishantie V   Roberts Christine M CM   Petrucelli Leonard L   Link Christopher D CD  

Molecular and cellular biology 20180716 15


TDP-1 is the <i>Caenorhabditis elegans</i> ortholog of mammalian TDP-43, which is strongly implicated in the etiology of frontotemporal dementia (FTD) and amyotrophic lateral sclerosis (ALS). We discovered that deletion of the <i>tdp-1</i> gene results in enhanced nuclear RNA interference (RNAi). As nuclear RNAi in <i>C. elegans</i> involves chromatin changes moderated by HPL-2, a homolog of heterochromatin protein 1 (HP1), we investigated the interaction of TDP-1 and HPL-2. We found that TDP-1  ...[more]

Similar Datasets

2018-05-17 | GSE100829 | GEO
| S-EPMC4282642 | biostudies-literature
| S-EPMC10324947 | biostudies-literature
| S-EPMC4317175 | biostudies-literature
| S-EPMC3334618 | biostudies-literature
| S-EPMC3390363 | biostudies-literature
| S-EPMC3075589 | biostudies-literature
| S-EPMC9066518 | biostudies-literature
2014-11-19 | GSE61581 | GEO
2014-11-19 | E-GEOD-61581 | biostudies-arrayexpress