Unknown

Dataset Information

0

Combinatorial knockout of RAR?, RAR?, and RAR? completely abrogates transcriptional responses to retinoic acid in murine embryonic stem cells.


ABSTRACT: All-trans-retinoic acid (RA), a potent inducer of cellular differentiation, functions as a ligand for retinoic acid receptors (RAR?, ?, and ?). RARs are activated by ligand binding, which induces transcription of direct genomic targets. However, whether embryonic stem cells respond to RA through routes that do not involve RARs is unknown. Here, we used CRISPR technology to introduce biallelic frameshift mutations in RAR?, RAR?, and RAR?, thereby abrogating all RAR functions in murine embryonic stem cells. We then evaluated RA-responsiveness of the RAR-null cells using RNA-Seq transcriptome analysis. We found that the RAR-null cells display no changes in transcripts in response to RA, demonstrating that the RARs are essential for the regulation of all transcripts in murine embryonic stem cells in response to RA. Our key finding, that in embryonic stem cells the transcriptional effects of RA all depend on RARs, addresses a long-standing topic of discussion in the field of retinoic acid signaling.

SUBMITTER: Laursen KB 

PROVIDER: S-EPMC6066298 | biostudies-literature | 2018 Jul

REPOSITORIES: biostudies-literature

altmetric image

Publications

Combinatorial knockout of RARα, RARβ, and RARγ completely abrogates transcriptional responses to retinoic acid in murine embryonic stem cells.

Laursen Kristian B KB   Gudas Lorraine J LJ  

The Journal of biological chemistry 20180530 30


All-<i>trans</i>-retinoic acid (RA), a potent inducer of cellular differentiation, functions as a ligand for retinoic acid receptors (RARα, β, and γ). RARs are activated by ligand binding, which induces transcription of direct genomic targets. However, whether embryonic stem cells respond to RA through routes that do not involve RARs is unknown. Here, we used CRISPR technology to introduce biallelic frameshift mutations in RARα, RARβ, and RARγ, thereby abrogating all RAR functions in murine embr  ...[more]

Similar Datasets

2018-05-25 | GSE112412 | GEO
| PRJNA445952 | ENA
| S-EPMC9711859 | biostudies-literature
| S-EPMC3680916 | biostudies-literature
| S-EPMC9312298 | biostudies-literature
| S-EPMC5796863 | biostudies-literature
| S-EPMC9600071 | biostudies-literature
2014-01-23 | GSE53736 | GEO
| S-EPMC3111438 | biostudies-literature
| S-EPMC2937099 | biostudies-literature