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Phenotypic trait variation measured on European genetic trials of Fagus sylvatica L.

ABSTRACT: We present BeechCOSTe52; a database of European beech (Fagus sylvatica) phenotypic measurements for several traits related to fitness measured in genetic trials planted across Europe. The dataset was compiled and harmonized during the COST-Action E52 (2006-2010), and subsequently cross-validated to ensure consistency of measurement data among trials and provenances. Phenotypic traits (height, diameter at breast height, basal diameter, mortality, phenology of spring bud burst and autumn-leaf discoloration) were recorded in 38 trial sites where 217 provenances covering the entire distribution of European beech were established in two consecutive series (1993/95 and 1996/98). The recorded data refer to 862,095 measurements of the same trees aged from 2 to 15 years old over multiple years. This dataset captures the considerable genetic and phenotypic intra-specific variation present in European beech and should be of interest to researchers from several disciplines including quantitative genetics, ecology, biogeography, macroecology, adaptive management of forests and bioeconomy.

SUBMITTER: Robson TM

PROVIDER: S-EPMC6067048 | biostudies-literature | 2018 Jul

REPOSITORIES: biostudies-literature

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Phenotypic trait variation measured on European genetic trials of Fagus sylvatica L.

Robson T Matthew TM Garzón Marta Benito MB

Scientific data 20180731

We present BeechCOSTe52; a database of European beech (Fagus sylvatica) phenotypic measurements for several traits related to fitness measured in genetic trials planted across Europe. The dataset was compiled and harmonized during the COST-Action E52 (2006-2010), and subsequently cross-validated to ensure consistency of measurement data among trials and provenances. Phenotypic traits (height, diameter at breast height, basal diameter, mortality, phenology of spring bud burst and autumn-leaf disc ...[more]

PMID: 30063224

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Project description:BACKGROUND: Microevolution is essential for species persistence especially under anticipated climate change scenarios. Species distribution projection models suggested that the dominant tree species of lowland forests in Switzerland, European beech (Fagus sylvatica L.), might disappear from most areas due to expected longer dry periods. However, if genotypes at the moisture boundary of the species climatic envelope are adapted to lower moisture availability, they can serve as seed source for the continuation of beech forests under changing climates. METHODOLOGY/PRINCIPAL FINDINGS: With an AFLP genome scan approach, we studied neutral and potentially adaptive genetic variation in Fagus sylvatica in three regions containing a dry and a mesic site each (n(ind.) = 241, n(markers) = 517). We linked this dataset with dendrochronological growth measures and local moisture availabilities based on precipitation and soil characteristics. Genetic diversity decreased slightly at dry sites. Overall genetic differentiation was low (F(st) = 0.028) and Bayesian cluster analysis grouped all populations together suggesting high (historical) gene flow. The Bayesian outlier analyses indicated 13 markers with three markers differing between all dry and mesic sites and the others between the contrasting sites within individual regions. A total of 41 markers, including seven outlier loci, changed their frequency with local moisture availability. Tree height and median basal growth increments were reduced at dry sites, but marker presence/absence was not related to dendrochronological characteristics. CONCLUSION AND THEIR SIGNIFICANCE: The outlier alleles and the makers with changing frequencies in relation to moisture availability indicate microevolutionary processes occurring within short geographic distances. The general genetic similarity among sites suggests that 'preadaptive' genes can easily spread across the landscape. Yet, due to the long live span of trees, fostering saplings originating from dry sites and grown within mesic sites might increase resistance of beech forests during the anticipated longer dry periods.

Project description:In this article, we outline the set-up and the application of an eco-hydrological box model, with the aim to describe the water balance of deciduous (Fagus Sylvatica L.) forest stands. The water balance model (WBM) uses standard meteorological parameters as input variables and runs on a daily time step. It consists of two modules. The aboveground module (1) comprises routines for fog precipitation generation, precipitation interception and snowfall/snowmelt dynamics. Covered belowground processes (2) are bypass flow, percolation, soil evaporation and transpiration, where the latter two processes are considered separately. Preceding to the WBM, a routine is introduced, specifying the intra-annual foliage dynamics of beech. Emphasis is also laid on the inter-annual variation of beech phenology. Leaf sprouting and leaf senescence are calculated as functions of day-length and air temperature. The WBM was applied to four European beech dominated forest stands in the northeastern part of Austria. They are located on a gradient of declining annual precipitation (from west to east). The two easterly sites are located close to the (dry) limit of the natural distribution of beech. Records of soil moisture were used for the adjustment of 26 parameters. On all sites the calibration process (simulated annealing) delivered good predictions of soil moisture (Nash-Sutcliffe efficiency? 0.925). Then, the obtained parameterization was used to apply different scenarios of global warming. The temperature was increased step-wisely up to 4 °C. All scenarios were run (1) with present phenological conditions and (2) with phenology responding to higher temperatures. This way, we wanted to assign the effect of higher temperatures and longer growing seasons on the water dynamics of the forest stands. A warming of 1 °C corresponded roughly to an elongation of the growing season of 4.5 days, where the start of the growing season was affected more strongly than the end. Apparently, higher temperatures led to drier soils. The strongest change was observed in early summer, also amplified by an earlier start of the growing season. Rising temperatures led to lower export fluxes of liquid water, simultaneously increasing evapotranspiration (ET). The gain in ET was almost entirely assignable to increased soil evaporation. Drier soils led to a sharp depression of transpiration during summer months. This decline was compensated by the effect of elongated growing seasons. The risk of severe drought was increased by higher temperatures, but here the contribution of growing season length was negligible. Drier soils seem to hamper the stands' productivity. For all warming scenarios, the estimated increase of the gross primary production, caused by longer periods of assimilation, is nullified by the effect of soil water deficit in mid-summer.

Dataset Information

Phenotypic trait variation measured on European genetic trials of Fagus sylvatica L.

Publications

Phenotypic trait variation measured on European genetic trials of Fagus sylvatica L.

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