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Compound heterozygous missense and deep intronic variants in NDUFAF6 unraveled by exome sequencing and mRNA analysis.

ABSTRACT: Biallelic mutations in NDUFAF6 have been identified as responsible for cases of autosomal recessive Leigh syndrome associated with mitochondrial complex I deficiency. Here we report two siblings and two unrelated subjects with Leigh syndrome, in which we found the same compound heterozygous missense (c.532G>C:p.A178P) and deep intronic (c.420+784C>T) variants in NDUFAF6. We demonstrated that the identified intronic variant creates an alternative splice site, leading to the production of an aberrant transcript. A detailed analysis of whole-exome sequencing data together with the functional validation based on mRNA analysis may reveal pathogenic variants even in non-exonic regions.

SUBMITTER: Catania A

PROVIDER: S-EPMC6071912 | biostudies-literature | 2018 May

REPOSITORIES: biostudies-literature

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Compound heterozygous missense and deep intronic variants in NDUFAF6 unraveled by exome sequencing and mRNA analysis.

Catania Alessia A Ardissone Anna A Verrigni Daniela D Legati Andrea A Reyes Aurelio A Lamantea Eleonora E Diodato Daria D Tonduti Davide D Imperatore Valentina V Pinto Anna Maria AM Moroni Isabella I Bertini Enrico E Robinson Alan A Carrozzo Rosalba R Zeviani Massimo M Ghezzi Daniele D

Journal of human genetics 20180312 5

Biallelic mutations in NDUFAF6 have been identified as responsible for cases of autosomal recessive Leigh syndrome associated with mitochondrial complex I deficiency. Here we report two siblings and two unrelated subjects with Leigh syndrome, in which we found the same compound heterozygous missense (c.532G>C:p.A178P) and deep intronic (c.420+784C>T) variants in NDUFAF6. We demonstrated that the identified intronic variant creates an alternative splice site, leading to the production of an aberr ...[more]

PMID: 29531337

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Author Correction: mRNA analysis identifies deep intronic variants causing Alport syndrome and overcomes the problem of negative results of exome sequencing.

Project description: Not available

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