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Differential expression of olive flounder (Paralichthys olivaceus) transcriptome during viral hemorrhagic septicemia virus (VHSV) infection at warmer and colder temperature.

ABSTRACT: The data presented here are related to the research article entitled "Temperature-dependent immune response of olive flounder (Paralichthys olivaceus) infected with viral hemorrhagic septicemia virus (VHSV)" [1]. In the cited article, we sequenced the whole transcriptome of the olive flounder using Illumina RNA-Seq. Differentially expressed genes (DEG) analysis of VHSV infected head kidney samples showed perturbations in gene expression. Herein we made a comparison of DEGs at early stage of VHSV infection of olive flounder (4?h post infection) in colder (13?°C) and warmer (20?°C) temperatures. The analysis of signaling pathways showed that several major immune pathways were altered. The gene ontology terms associated with the genes differentially expressed are also presented.

SUBMITTER: Jeong JM

PROVIDER: S-EPMC6141370 | biostudies-literature | 2018 Aug

REPOSITORIES: biostudies-literature

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Differential expression of olive flounder (<i>Paralichthys olivaceus</i>) transcriptome during viral hemorrhagic septicemia virus (VHSV) infection at warmer and colder temperature.

Jeong Ji-Min JM Jeswin Joseph J Bae Jin-Sol JS Park Chan-Il CI

Data in brief 20180628

The data presented here are related to the research article entitled "Temperature-dependent immune response of olive flounder (<i>Paralichthys olivaceus</i>) infected with viral hemorrhagic septicemia virus (VHSV)" [1]. In the cited article, we sequenced the whole transcriptome of the olive flounder using Illumina RNA-Seq. Differentially expressed genes (DEG) analysis of VHSV infected head kidney samples showed perturbations in gene expression. Herein we made a comparison of DEGs at early stage ...[more]

PMID: 30229076

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