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Metal-free class Ie ribonucleotide reductase from pathogens initiates catalysis with a tyrosine-derived dihydroxyphenylalanine radical.


ABSTRACT: All cells obtain 2'-deoxyribonucleotides for DNA synthesis through the activity of a ribonucleotide reductase (RNR). The class I RNRs found in humans and pathogenic bacteria differ in (i) use of Fe(II), Mn(II), or both for activation of the dinuclear-metallocofactor subunit, ?; (ii) reaction of the reduced dimetal center with dioxygen or superoxide for this activation; (iii) requirement (or lack thereof) for a flavoprotein activase, NrdI, to provide the superoxide from O2; and (iv) use of either a stable tyrosyl radical or a high-valent dimetal cluster to initiate each turnover by oxidizing a cysteine residue in the ? subunit to a radical (Cys•). The use of manganese by bacterial class I, subclass b-d RNRs, which contrasts with the exclusive use of iron by the eukaryotic Ia enzymes, appears to be a countermeasure of certain pathogens against iron deprivation imposed by their hosts. Here, we report a metal-free type of class I RNR (subclass e) from two human pathogens. The Cys• in its ? subunit is generated by a stable, tyrosine-derived dihydroxyphenylalanine radical (DOPA•) in ?. The three-electron oxidation producing DOPA• occurs in Escherichia coli only if the ? is coexpressed with the NrdI activase encoded adjacently in the pathogen genome. The independence of this new RNR from transition metals, or the requirement for a single metal ion only transiently for activation, may afford the pathogens an even more potent countermeasure against transition metal-directed innate immunity.

SUBMITTER: Blaesi EJ 

PROVIDER: S-EPMC6176560 | biostudies-literature | 2018 Oct

REPOSITORIES: biostudies-literature

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Metal-free class Ie ribonucleotide reductase from pathogens initiates catalysis with a tyrosine-derived dihydroxyphenylalanine radical.

Blaesi Elizabeth J EJ   Palowitch Gavin M GM   Hu Kai K   Kim Amelia J AJ   Rose Hannah R HR   Alapati Rahul R   Lougee Marshall G MG   Kim Hee Jong HJ   Taguchi Alexander T AT   Tan Kong Ooi KO   Laremore Tatiana N TN   Griffin Robert G RG   Krebs Carsten C   Matthews Megan L ML   Silakov Alexey A   Bollinger J Martin JM   Allen Benjamin D BD   Boal Amie K AK  

Proceedings of the National Academy of Sciences of the United States of America 20180917 40


All cells obtain 2'-deoxyribonucleotides for DNA synthesis through the activity of a ribonucleotide reductase (RNR). The class I RNRs found in humans and pathogenic bacteria differ in (<i>i</i>) use of Fe(II), Mn(II), or both for activation of the dinuclear-metallocofactor subunit, β; (<i>ii</i>) reaction of the reduced dimetal center with dioxygen or superoxide for this activation; (<i>iii</i>) requirement (or lack thereof) for a flavoprotein activase, NrdI, to provide the superoxide from O<sub  ...[more]

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