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Genomic and phenotypic description of the newly isolated human species Collinsella bouchesdurhonensis sp. nov.

ABSTRACT: Using culturomics, a recently developed strategy based on diversified culture conditions for the isolation of previously uncultured bacteria, we isolated strain Marseille-P3296T from a fecal sample of a healthy pygmy female. A multiphasic approach, taxono-genomics, was used to describe the major characteristics of this anaerobic and gram-positive bacillus that is unable to sporulate and is not motile. The genome of this bacterium is 1,878,572 bp-long with a 57.94 mol% G + C content. On the basis of these characteristics and after comparison with its closest phylogenetic neighbors, we are confident that strain Marseille-P3296T (=CCUG 70328 = CSUR P3296) is the type strain of a novel species for which we propose the name Collinsella bouchesdurhonensis sp. nov.

SUBMITTER: Bilen M

PROVIDER: S-EPMC6182551 | biostudies-literature | 2018 Oct

REPOSITORIES: biostudies-literature

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Genomic and phenotypic description of the newly isolated human species Collinsella bouchesdurhonensis sp. nov.

Bilen Melhem M Beye Mamadou M Mbogning Fonkou Maxime Descartes MD Khelaifia Saber S Cadoret Frédéric F Armstrong Nicholas N Nguyen Thi Tien TT Delerce Jérémy J Daoud Ziad Z Raoult Didier D Fournier Pierre-Edouard PE

MicrobiologyOpen 20180613 5

Using culturomics, a recently developed strategy based on diversified culture conditions for the isolation of previously uncultured bacteria, we isolated strain Marseille-P3296T from a fecal sample of a healthy pygmy female. A multiphasic approach, taxono-genomics, was used to describe the major characteristics of this anaerobic and gram-positive bacillus that is unable to sporulate and is not motile. The genome of this bacterium is 1,878,572 bp-long with a 57.94 mol% G + C content. O ...[more]

PMID: 29900684

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