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Association genetics of acetophenone defence against spruce budworm in mature white spruce.

ABSTRACT: BACKGROUND:Outbreaks of spruce budworm (SBW, Choristoneura fumiferana Clem.) cause major recurrent damage in boreal conifers such as white spruce (Picea glauca [Moench] Voss) and large losses of forest biomass in North America. Although defensive phenolic compounds have recently been linked to chemical resistance against SBW, their genetic basis remains poorly understood in forest trees, especially in conifers. Here, we used diverse association genetics approaches to discover genes and their variants that may control the accumulation of acetophenones, and dissect the genetic architecture of these defence compounds against SBW in white spruce mature trees. RESULTS:Out of 4747 single nucleotide polymorphisms (SNPs) from 2312 genes genotyped in a population of 211 unrelated individuals, genetic association analyses identified 35 SNPs in 33 different genes that were significantly associated with the defence traits by using single-locus, multi-locus and multi-trait approaches. The multi-locus approach was particularly effective at detecting SNP-trait associations that explained a large fraction of the phenotypic variance (from 20 to 43%). Significant genes were regulatory including the NAC transcription factor, or they were involved in carbohydrate metabolism, falling into the binding, catalytic or transporter activity functional classes. Most of them were highly expressed in foliage. Weak positive phenotypic correlations were observed between defence and growth traits, indicating little or no evidence of defence-growth trade-offs. CONCLUSIONS:This study provides new insights on the genetic architecture of tree defence traits, contributing to our understanding of the physiology of resistance mechanisms to biotic factors and providing a basis for the genetic improvement of the constitutive defence of white spruce against SBW.

SUBMITTER: Lamara M

PROVIDER: S-EPMC6182838 | biostudies-literature | 2018 Oct

REPOSITORIES: biostudies-literature

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Association genetics of acetophenone defence against spruce budworm in mature white spruce.

Lamara Mebarek M Parent Geneviève J GJ Giguère Isabelle I Beaulieu Jean J Bousquet Jean J MacKay John J JJ

BMC plant biology 20181012 1

<h4>Background</h4>Outbreaks of spruce budworm (SBW, Choristoneura fumiferana Clem.) cause major recurrent damage in boreal conifers such as white spruce (Picea glauca [Moench] Voss) and large losses of forest biomass in North America. Although defensive phenolic compounds have recently been linked to chemical resistance against SBW, their genetic basis remains poorly understood in forest trees, especially in conifers. Here, we used diverse association genetics approaches to discover genes and t ...[more]

PMID: 30309315

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Project description:In Canada, new forestry practices involving the natural dynamics of tree growth and regeneration are proposed for integrating forest management with biodiversity. In particular, the current spruce budworm [Choristoneura fumiferana (Clemens)] outbreak in northeastern North America is forcing natural resource managers to clarify the potential interactions between natural disturbances and commercial thinning. The aim of this study was to investigate if the spruce budworm outbreak of the 1970s affected the responses of black spruce [Picea mariana (Mill.) B.S.P.] to a subsequent thinning. Stem growth was reconstructed by measuring and cross-dating chronologies of tree-ring width of 1290 adult trees from 34 control and thinned stands within an area of 11,000 km2 in the boreal forest of the Saguenay-Lac-Saint-Jean region (QC, Canada). The treatment consisted of a low thinning performed during 1995-1999 that removed 25-35% of the basal area. Segmented models were applied to the tree-ring chronologies to define the growth pattern during the outbreak and thinning periods within a time window of 8 years, representing the average duration of the effects of defoliation on growth. Trees showed abrupt growth decreases during the outbreak, with the tree-ring index showing minimum values in 1977-1979. The tree-ring index had a flat trend before thinning, while it increased for 6-10 years after thinning. The growth pattern during the outbreak period was characterized by a reduction, mainly in trees with larger tree rings, while slow-growing trees showed less sensitivity to the disturbance. Thinning produced a significant increase in tree growth. No relationship was found between the effects of spruce budworm outbreaks in trees and the changes in growth pattern after thinning. If the timespan between the two disturbances exceeds 7 years, partial cutting can be applied independently of the growth reductions that had occurred during the outbreak. When applied in black spruce stands with high annual radial growth, thinning is expected to optimize the volume growth of the residual trees.

Dataset Information

Association genetics of acetophenone defence against spruce budworm in mature white spruce.

Publications

Association genetics of acetophenone defence against spruce budworm in mature white spruce.

Similar Datasets

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