Dataset Information

Residue management alters microbial diversity and activity without affecting their community composition in black soil, Northeast China.

ABSTRACT: Residue management is an important agricultural practice for improving soil fertility. To reveal the impact of residue management on soil microbial community, we conducted a field experiment with three treatments: no straw returning (control, CK), straw returning (SR), and straw returning combined with cow manure (SM). Our results indicated that soil organic matter content was significantly higher in SR treatment than CK in both seedling and jointing stages. In seedling stage, the lowest total nitrogen content was observed in CK treatment, and significantly lower than that in SM and SR treatment. Furthermore, soil available phosphorus content was significantly higher in SM and SR treatment than CK in jointing stage. In the seedling stage, the soil microbial average wellcolor development (AWCD) value, microbial McIntosh index, and Shannon index of CK and SM treatments were significantly higher than those in SR treatment. The AWCD value and McIntosh index in the jointing stage showed similar patterns: SM > CK > SR. Permutational multivariate analysis of variance indicated that soil microbial community was significantly affected by growth stage, but unaffected by residue management. The partial Mantel test revealed that the available potassium and the C/N ratio had independent effects on soil microbial community. Overall, our results indicated that straw returning combined with cow manure had a beneficial effect on soil fertility, microbial activity and diversity.

SUBMITTER: Gu S

PROVIDER: S-EPMC6186157 | biostudies-literature | 2018

REPOSITORIES: biostudies-literature

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Residue management alters microbial diversity and activity without affecting their community composition in black soil, Northeast China.

Gu Siyu S Guo Xingjun X Cai Yuetong Y Zhang Zehui Z Wu Shuai S Li Xin X Zhang Huihui H Yang Wei W

PeerJ 20181010

Residue management is an important agricultural practice for improving soil fertility. To reveal the impact of residue management on soil microbial community, we conducted a field experiment with three treatments: no straw returning (control, CK), straw returning (SR), and straw returning combined with cow manure (SM). Our results indicated that soil organic matter content was significantly higher in SR treatment than CK in both seedling and jointing stages. In seedling stage, the lowest total n ...[more]

PMID: 30324027

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Project description:Microorganisms are critical in mediating carbon (C) and nitrogen (N) cycling processes in soils. Yet, it has long been debated whether the processes underlying biogeochemical cycles are affected by the composition and diversity of the soil microbial community or not. The composition and diversity of soil microbial communities can be influenced by various environmental factors, which in turn are known to impact biogeochemical processes. The objectives of this study were to test effects of multiple edaphic drivers individually and represented as the multivariate soil environment interacting with microbial community composition and diversity, and concomitantly on multiple soil functions (i.e. soil enzyme activities, soil C and N processes). We employed high-throughput sequencing (Illumina MiSeq) to analyze bacterial/archaeal and fungal community composition by targeting the 16S rRNA gene and the ITS1 region of soils collected from three land uses (cropland, grassland and forest) deriving from two bedrock forms (silicate and limestone). Based on this data set we explored single and combined effects of edaphic variables on soil microbial community structure and diversity, as well as on soil enzyme activities and several soil C and N processes. We found that both bacterial/archaeal and fungal communities were shaped by the same edaphic factors, with most single edaphic variables and the combined soil environment representation exerting stronger effects on bacterial/archaeal communities than on fungal communities, as demonstrated by (partial) Mantel tests. We also found similar edaphic controls on the bacterial/archaeal/fungal richness and diversity. Soil C processes were only directly affected by the soil environment but not affected by microbial community composition. In contrast, soil N processes were significantly related to bacterial/archaeal community composition and bacterial/archaeal/fungal richness/diversity but not directly affected by the soil environment. This indicates direct control of the soil environment on soil C processes and indirect control of the soil environment on soil N processes by structuring the microbial communities. The study further highlights the importance of edaphic drivers and microbial communities (i.e. composition and diversity) on important soil C and N processes.

Project description:IntroductionConservation tillage is a widely used technique worldwide, but the effects of conservation tillage on bacterial community structure are poorly understood. We explored proportional alterations in the bacterial community under different tillage treatments.MethodologyHence, this study utilized high-throughput sequencing technique to investigate the structure and assembly processes of microbial communities in different tillage treatments.Results and discussionTillage treatments included tillage no-straw retention (CntWt), no-tillage with straw retention (CntWntS), tillage with straw retention (CntWtS), no-tillage and no-straw retention (CntWnt). The influence of tillage practices on soil bacterial communities was investigated using Illumina MiSeq sequencing. Different tillage methods and straw retention systems significantly influenced soil parameters such as total potassium and pH were not affected by tillage practices, while straw retention significantly affected soil parameters including nitrogen content, available phosphorus and available potassium. Straw retention decreased bacterial diversity while increased bacterial richness. The effect of straw retention and tillage on bacterial communities was greater than with no tillage. Phylogenetic β-diversity analysis showed that deterministic homogeneous selection processes were dominated, while stochastic processes were more pronounced in tillage without straw retention. Ecological network analysis showed that microbial community correlation was increased in CntWntS and CntWnt. Straw retention treatment significantly increased the relative abundance of bacterial taxa Proteobacteria, Bacteroidetes, and OD1, while Nitrospirae, Actinobacteria, and Verrucomicrobia significantly decreased.ConclusionThe conservation tillage practices significantly affect soil properties, bacterial composition, and assembly processes; however, further studies are required to investigate the impact of different crops, tillage practices and physiological characteristics on bacterial community structure and functions.

Dataset Information

Residue management alters microbial diversity and activity without affecting their community composition in black soil, Northeast China.

Publications

Residue management alters microbial diversity and activity without affecting their community composition in black soil, Northeast China.

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