Unknown

Dataset Information

0

Determination of major histocompatibility class I and class II genetic composition of the Caribbean Primate Center specific pathogen-free rhesus macaque (Macaca mulatta) colony based on massively parallel sequencing.


ABSTRACT: BACKGROUND:Knowledge of major histocompatibility complex (MHC) composition and distribution in rhesus macaque colonies is critical for management strategies that maximize the utility of this model for biomedical research. METHODS:Variation within the Mamu-A and Mamu-B (class I) and DRB, DQA/B, and DPA/B (class II) regions of 379 animals from the Caribbean Primate Research Center's (CPRC) specific pathogen free (SPF) colony was examined using massively parallel sequencing. RESULTS:Analyses of the 7 MHC loci revealed a background of Indian origin with high levels of variation despite past genetic bottlenecks. All loci exhibited mutual linkage disequilibria while conforming to Hardy-Weinberg expectations suggesting the achievement of mutation-selection balance. CONCLUSION:The CPRC's SPF colony is a significant resource for research on AIDS and other infectious agents. Characterizing colony-wide MHC variability facilitates the breeding and selection of animals bearing desired haplotypes and increases the investigator's ability to understand the immune responses mounted by these animals.

SUBMITTER: Kanthaswamy S 

PROVIDER: S-EPMC6234078 | biostudies-literature | 2018 Dec

REPOSITORIES: biostudies-literature

altmetric image

Publications

Determination of major histocompatibility class I and class II genetic composition of the Caribbean Primate Center specific pathogen-free rhesus macaque (Macaca mulatta) colony based on massively parallel sequencing.

Kanthaswamy Sreetharan S   Oldt Robert F RF   Ng Jillian J   Smith David Glenn DG   Martínez Melween I MI   Sariol Carlos A CA  

Journal of medical primatology 20180704 6


<h4>Background</h4>Knowledge of major histocompatibility complex (MHC) composition and distribution in rhesus macaque colonies is critical for management strategies that maximize the utility of this model for biomedical research.<h4>Methods</h4>Variation within the Mamu-A and Mamu-B (class I) and DRB, DQA/B, and DPA/B (class II) regions of 379 animals from the Caribbean Primate Research Center's (CPRC) specific pathogen free (SPF) colony was examined using massively parallel sequencing.<h4>Resul  ...[more]

Similar Datasets

| S-EPMC3820923 | biostudies-literature
2018-08-09 | GSE118284 | GEO
| S-EPMC1859839 | biostudies-literature
| S-EPMC5881168 | biostudies-literature
| S-EPMC6922351 | biostudies-literature
| S-EPMC5930483 | biostudies-literature
| S-EPMC3207016 | biostudies-other
| S-EPMC2941796 | biostudies-literature
| S-EPMC2443142 | biostudies-literature