Ontology highlight
ABSTRACT:
SUBMITTER: Biton M
PROVIDER: S-EPMC6239889 | biostudies-literature | 2018 Nov
REPOSITORIES: biostudies-literature
Biton Moshe M Haber Adam L AL Rogel Noga N Burgin Grace G Beyaz Semir S Schnell Alexandra A Ashenberg Orr O Su Chien-Wen CW Smillie Christopher C Shekhar Karthik K Chen Zuojia Z Wu Chuan C Ordovas-Montanes Jose J Alvarez David D Herbst Rebecca H RH Zhang Mei M Tirosh Itay I Dionne Danielle D Nguyen Lan T LT Xifaras Michael E ME Shalek Alex K AK von Andrian Ulrich H UH Graham Daniel B DB Rozenblatt-Rosen Orit O Shi Hai Ning HN Kuchroo Vijay V Yilmaz Omer H OH Regev Aviv A Xavier Ramnik J RJ
Cell 20181101 5
In the small intestine, a niche of accessory cell types supports the generation of mature epithelial cell types from intestinal stem cells (ISCs). It is unclear, however, if and how immune cells in the niche affect ISC fate or the balance between self-renewal and differentiation. Here, we use single-cell RNA sequencing (scRNA-seq) to identify MHC class II (MHCII) machinery enrichment in two subsets of Lgr5<sup>+</sup> ISCs. We show that MHCII<sup>+</sup> Lgr5<sup>+</sup> ISCs are non-conventiona ...[more]