Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Complete Genome Sequence of Escherichia Phage vB_EcoM-Pr121LW, Isolated from Soil in an Organic Farm.

ABSTRACT: Here, we report a new member of rV5-like phages, Escherichia phage vB_EcoM-Pr121LW, isolated from soil samples and lytic against different serogroups of Shiga toxin-producing Escherichia coli (STEC) strains. With molecular properties that contain no antibiotic resistance, virulence, or lysogenic genes, this phage is a potential biocontrol agent against STEC.

SUBMITTER: Liao YT

PROVIDER: S-EPMC6256614 | biostudies-literature | 2018 Nov

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Complete Genome Sequence of <i>Escherichia</i> Phage vB_EcoM-Pr121LW, Isolated from Soil in an Organic Farm.

Liao Yen-Te YT Liu Fang F Wu Vivian C H VCH

Microbiology resource announcements 20181121 20

Here, we report a new member of rV5-like phages, Escherichia phage vB_EcoM-Pr121LW, isolated from soil samples and lytic against different serogroups of Shiga toxin-producing Escherichia coli (STEC) strains. With molecular properties that contain no antibiotic resistance, virulence, or lysogenic genes, this phage is a potential biocontrol agent against STEC. ...[more]

PMID: 30533815

Similar Datasets

Complete Genome Sequence of Escherichia coli Phage vB_EcoM Sa157lw, Isolated from Surface Water Collected in Salinas, California.

Project description:Here, we report the complete genome sequence of a new member of Vi1-like phages, Escherichia coli phage vB_EcoM Sa157lw, isolated from surface water collected near a produce-growing area in California. This phage does not harbor stx or other lysogeny-associated genes and therefore may have biocontrol application potential.

| S-EPMC6706689 | biostudies-literature

Complete Genome Sequence of Escherichia-Infecting Phage CEC_KAZ_2018, Isolated from Soil.

Project description:Avian pathogenic Escherichia coli (APEC) bacteria are one of the main problems of the poultry industry. An effective way to combat colibacillosis is to use a phage preparation that lyses the bacteria. Here, we report the isolation of an E. coli-infecting phage, CEC_KAZ_2018, isolated from soil.

| S-EPMC6728635 | biostudies-literature

Genome Sequence of a T4-like Phage, Escherichia Phage vB_EcoM-Sa45lw, Infecting Shiga Toxin-Producing Escherichia coli Strains.

Project description:Escherichia phage vB_EcoM-Sa45lw, a new member of the T4-like phages, was isolated from surface water in a produce-growing area. The phage, containing double-stranded DNA with a genome size of 167,353 bp and 282 predicted open reading frames (ORFs), is able to infect generic Escherichia coli and Shiga toxin-producing E. coli O45 and O157 strains.

| S-EPMC6687937 | biostudies-literature

Draft Genome Sequence of Escherichia coli Phage CMSTMSU, Isolated from Shrimp Farm Effluent Water.

Project description:The Escherichia coli phage CMSTMSU was isolated from shrimp farm effluent water in Ramanathapuram, India. The phage exhibited lytic activity against both E. coli and the fish pathogen Pseudomonas aeruginosa. Here we report the draft genome sequence, assembly, and annotation of the isolated CMSTMSU phage. This genome resource can be used to utilize the phage as a crucial biocontrol agent in the fish aquaculture sector.

| S-EPMC6256653 | biostudies-literature

Complete Genome Sequence of <i>Effusibacillus</i> sp. Strain skT53, Isolated from Farm Soil.

Project description:This study reports the complete genome sequence of Effusibacillus sp. strain skT53. The genome is 3,454,394 bp in length and has a G+C content of 48.22 mol%.

| S-EPMC8297450 | biostudies-literature

Complete Genome Sequence of Escherichia Phage OSYSP.

Project description:Bacteriophage OSYSP is a new anti-Escherichia coli O157:H7 phage isolated from municipal wastewater in Ohio. OSYSP is potent against enterohemorrhagic E. coli and is a candidate biocontrol agent for food and therapeutic applications. In this paper, we present the important genetic features of this phage based on its complete genome sequence.

| S-EPMC5646388 | biostudies-literature

Complete Genome Sequence of Escherichia coli Phage APC_JM3.2 Isolated from a Chicken Cecum.

Project description:Avian pathogenic Escherichia coli (APEC) bacteria are a significant challenge to the poultry industry. Bacteriophages (phages) have the potential to control APEC strains, increasing animal welfare and economic productivity. Here, we report the isolation of an E. coli-infecting phage, APC_JM3.2, isolated from the cecum of a broiler chicken in Ireland.

| S-EPMC5754480 | biostudies-literature

Complete Genome Sequence of Escherichia coli Phage Paul.

Project description:Escherichia coli is both a commensal and a pathogen in humans and other animals. Here, we describe the isolation of E. coli strain 4s bacteriophage Paul. The complete 79,429-bp genome was annotated and demonstrates similarity with phieco32viruses, as does its prolate podophage morphology.

| S-EPMC6787329 | biostudies-literature

Complete Genome Sequence of Escherichia coli Phage Pisces.

Project description:Podophage Pisces was isolated against Escherichia coli strain 4s from wastewater samples. Pisces is a T7-like phage, and all 49 predicted protein-coding genes in it are present on a single strand and are surrounded by 190-bp terminal repeats. Due to its similarity to other T7-like phages, 61% of Pisces genes were assigned a predicted function.

| S-EPMC6763662 | biostudies-literature

Complete Genome Sequence of Escherichia coli Phage vB_EcoM_Alf5.

Project description:Here, we announce the complete genome sequence of the Escherichia coli myophage vB_EcoM_Alf5 belonging to the genus Felixo1virus, whose members have not been comprehensively studied at the molecular level. Phage vB_EcoM_Alf5 infects E. coli K-12-derived laboratory strains and therefore is well suited for functional studies.

| S-EPMC5477317 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data