Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Draft Genome Sequence of Scytalidium lignicola DSM 105466, a Ubiquitous Saprotrophic Fungus.

ABSTRACT: Scytalidium lignicola is a ubiquitous anamorphic ascomycete and belongs to a genus that includes several phytopathogenic fungi. The strain sequenced in this study (DSM 105466) was isolated from leaves of Quercus robur. The draft genome has a size of 47.7 Mb and contains 12,795 protein-coding genes.

SUBMITTER: Buttner E

PROVIDER: S-EPMC6256649 | biostudies-literature | 2018 Oct

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Draft Genome Sequence of Scytalidium lignicola DSM 105466, a Ubiquitous Saprotrophic Fungus.

Büttner Enrico E Gebauer Anna Maria AM Hofrichter Martin M Liers Christiane C Kellner Harald H

Microbiology resource announcements 20181011 14

Scytalidium lignicola is a ubiquitous anamorphic ascomycete and belongs to a genus that includes several phytopathogenic fungi. The strain sequenced in this study (DSM 105466) was isolated from leaves of Quercus robur. The draft genome has a size of 47.7 Mb and contains 12,795 protein-coding genes. ...[more]

PMID: 30533718

Similar Datasets

Draft Genome Sequence of Xylaria hypoxylon DSM 108379, a Ubiquitous Fungus on Hardwood.

Project description:The saprotrophic ascomycete Xylaria hypoxylon is a widespread wood-decaying fungus on deciduous trees. Here, we report its draft genome sequence. The genome assembly has a size of 42.8 Mbp and a G+C content of 47.1% and includes 11,038 predicted genes.

| S-EPMC6953518 | biostudies-literature

Draft Genome Sequence of Xylaria longipes DSM 107183, a Saprotrophic Ascomycete Colonizing Hardwood.

Project description:The saprotrophic soft-rot fungus Xylaria longipes was isolated from deadwood of Acer pseudoplatanus collected in the Bavarian Forest, Germany. The whole genome of this strain (DSM 107183) was sequenced with a total size of 43.2 Mb and a G+C content of 48.5%. The genome comprises 12,638 predicted coding sequences.

| S-EPMC6430320 | biostudies-literature

Draft Genome Sequence of Mycobacterium cosmeticum DSM 44829.

Project description:We announce the draft genome sequence of Mycobacterium cosmeticum strain DSM 44829, a nontuberculous species responsible for opportunistic infection. The genome described here is composed of 6,462,090 bp, with a G+C content of 68.24%. It contains 6,281 protein-coding genes and 75 predicted RNA genes.

| S-EPMC3983316 | biostudies-other

Draft Genome Sequence of Mycobacterium mageritense DSM 44476T.

Project description:We report the draft genome sequence of Mycobacterium mageritense strain DSM 44476(T) (CIP 104973), a nontuberculosis species responsible for various infections. The genome described here is composed of 7,966,608 bp, with a G+C content of 66.95%, and contains 7,675 protein-coding genes and 120 predicted RNA genes.

| S-EPMC4007989 | biostudies-other

Draft Genome Sequence of Mycobacterium vulneris DSM 45247T.

Project description:We report the draft genome sequence of Mycobacterium vulneris DSM 45247(T) strain, an emerging, opportunistic pathogen of the Mycobacterium avium complex. The genome described here is composed of 6,981,439 bp (with a G+C content of 67.14%) and has 6,653 protein-coding genes and 84 predicted RNA genes.

| S-EPMC4014686 | biostudies-other

High-Quality Draft Genome Sequence of the Microcolonial Black Fungus Aeminium ludgeri DSM 106916.

Project description:Aeminium ludgeri is an extremotolerant microcolonial black fungus isolated from a biodeteriorated limestone art piece in the Old Cathedral of Coimbra, Portugal (a UNESCO World Heritage Site). The high-quality draft genome sequence of Aeminium ludgeri presented here represents the first sequenced genome for both the recently described fungal family Aeminiaceae and the genus Aeminium.

| S-EPMC6449558 | biostudies-literature

Draft Genome of the Entomopathogenic Fungus Metarhizium robertsii DSM 1490.

Project description:Metarhizium robertsii DSM 1490 is a generalist entomopathogenic fungus. The mechanisms of pathogenesis of such fungi in insects like termites are not completely understood. Here, we report the draft genome sequence, as sequenced on the Oxford Nanopore platform. The genome has a GC% of 47.82 and a size of 45,688,865 bp.

| S-EPMC10190618 | biostudies-literature

Draft Genome Sequence of Mycobacterium austroafricanum DSM 44191.

Project description:We announce the draft genome sequence of Mycobacterium austroafricanum DSM 44191(T) (= E9789-SA12441(T)), a non-tuberculosis species responsible for opportunistic infection. The genome described here has a size of 6,772,357 bp with a G+C content of 66.79% and contains 6,419 protein-coding genes and 112 RNA genes.

| S-EPMC3990752 | biostudies-literature

Draft Genome Sequence of Mycobacterium neoaurum Strain DSM 44074T.

Project description:We report the draft genome sequence of Mycobacterium neoaurum strain DSM 44074(T), a nontuberculosis species responsible for opportunistic infections in immunocompromised patients. The strain described here is composed of 5,536,033 bp, with a G+C content of 66.24%, and carries 5,274 protein-coding genes and 72 RNA genes.

| S-EPMC4110757 | biostudies-literature

Draft Genome Sequence of Amycolatopsis decaplanina Strain DSM 44594T.

Project description:We report the 8.5-Mb genome sequence of Amycolatopsis decaplanina strain DSM 44594(T), isolated from a soil sample from India. The draft genome of strain DSM 44594(T) consists of 8,533,276 bp with a 68.6% G+C content, 7,899 protein-coding genes, and 57 RNAs.

| S-EPMC3623004 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data