Ontology highlight
ABSTRACT:
SUBMITTER: Gaviraghi M
PROVIDER: S-EPMC6276881 | biostudies-literature | 2018 Dec
REPOSITORIES: biostudies-literature
Gaviraghi Marco M Vivori Claudia C Pareja Sanchez Yerma Y Invernizzi Francesca F Cattaneo Angela A Santoliquido Benedetta Maria BM Frenquelli Michela M Segalla Simona S Bachi Angela A Doglioni Claudio C Pelechano Vicent V Cittaro Davide D Tonon Giovanni G
The EMBO journal 20181029 23
Focal deletions occur frequently in the cancer genome. However, the putative tumor-suppressive genes residing within these regions have been difficult to pinpoint. To robustly identify these genes, we implemented a computational approach based on non-negative matrix factorization, NMF, and interrogated the TCGA dataset. This analysis revealed a metagene signature including a small subset of genes showing pervasive hemizygous deletions, reduced expression in cancer patient samples, and nucleolar ...[more]