LS-SNP/PDB: annotated non-synonymous SNPs mapped to Protein Data Bank structures.
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ABSTRACT:
SUBMITTER: Ryan M
PROVIDER: S-EPMC6276889 | biostudies-literature | 2009 Jun
REPOSITORIES: biostudies-literature
Publications
LS-SNP/PDB: annotated non-synonymous SNPs mapped to Protein Data Bank structures.
Ryan Michael M Diekhans Mark M Lien Stephanie S Liu Yun Y Karchin Rachel R
Bioinformatics (Oxford, England) 20090415 11
<h4>Summary</h4>LS-SNP/PDB is a new WWW resource for genome-wide annotation of human non-synonymous (amino acid changing) SNPs. It serves high-quality protein graphics rendered with UCSF Chimera molecular visualization software. The system is kept up-to-date by an automated, high-throughput build pipeline that systematically maps human nsSNPs onto Protein Data Bank structures and annotates several biologically relevant features.<h4>Availability</h4>LS-SNP/PDB is available at (http://ls-snp.icm.j ...[more]
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