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Why rankings of biomedical image analysis competitions should be interpreted with care.


ABSTRACT: International challenges have become the standard for validation of biomedical image analysis methods. Given their scientific impact, it is surprising that a critical analysis of common practices related to the organization of challenges has not yet been performed. In this paper, we present a comprehensive analysis of biomedical image analysis challenges conducted up to now. We demonstrate the importance of challenges and show that the lack of quality control has critical consequences. First, reproducibility and interpretation of the results is often hampered as only a fraction of relevant information is typically provided. Second, the rank of an algorithm is generally not robust to a number of variables such as the test data used for validation, the ranking scheme applied and the observers that make the reference annotations. To overcome these problems, we recommend best practice guidelines and define open research questions to be addressed in the future.

SUBMITTER: Maier-Hein L 

PROVIDER: S-EPMC6284017 | biostudies-literature | 2018 Dec

REPOSITORIES: biostudies-literature

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Why rankings of biomedical image analysis competitions should be interpreted with care.

Maier-Hein Lena L   Eisenmann Matthias M   Reinke Annika A   Onogur Sinan S   Stankovic Marko M   Scholz Patrick P   Arbel Tal T   Bogunovic Hrvoje H   Bradley Andrew P AP   Carass Aaron A   Feldmann Carolin C   Frangi Alejandro F AF   Full Peter M PM   van Ginneken Bram B   Hanbury Allan A   Honauer Katrin K   Kozubek Michal M   Landman Bennett A BA   März Keno K   Maier Oskar O   Maier-Hein Klaus K   Menze Bjoern H BH   Müller Henning H   Neher Peter F PF   Niessen Wiro W   Rajpoot Nasir N   Sharp Gregory C GC   Sirinukunwattana Korsuk K   Speidel Stefanie S   Stock Christian C   Stoyanov Danail D   Taha Abdel Aziz AA   van der Sommen Fons F   Wang Ching-Wei CW   Weber Marc-André MA   Zheng Guoyan G   Jannin Pierre P   Kopp-Schneider Annette A  

Nature communications 20181206 1


International challenges have become the standard for validation of biomedical image analysis methods. Given their scientific impact, it is surprising that a critical analysis of common practices related to the organization of challenges has not yet been performed. In this paper, we present a comprehensive analysis of biomedical image analysis challenges conducted up to now. We demonstrate the importance of challenges and show that the lack of quality control has critical consequences. First, re  ...[more]

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