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Microbial community composition and diversity in the Indian Ocean deep sea REY-rich muds.

ABSTRACT: Studies about the composition and diversity of microbial community in the Rare Earth Elements-rich muds are limited. In this research, we conducted a characterization for the composition and diversity of bacterial and archaeal communities from rare earth elements-rich gravity core sediment at approximately 4800 meters deep in the Indian Ocean by Illumina high-throughput sequencing targeting 16S rRNA genes. The results showed that the most abundant bacteria were Proteobacteria, followed by Firmicutes and Actinobacteria. Amongst Proteobacteria, Gammaproteobacteria are present in all sections of this sediment core accounted for a particularly large proportion of bacterial sequences. Candidatus Nitrosopumilus, with a higher relative abundance in our samples, belongs to Thaumarchaeota. This is the first report on the composition and diversity of rare earth elements-rich muds microbial communities in the Indian Ocean deep sea.

SUBMITTER: Wang S

PROVIDER: S-EPMC6296507 | biostudies-literature | 2018

REPOSITORIES: biostudies-literature

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Microbial community composition and diversity in the Indian Ocean deep sea REY-rich muds.

Wang Shuyan S Yu Miao M Wei Jiaqiang J Huang Mu M Shi Xuefa X Chen Hao H

PloS one 20181217 12

Studies about the composition and diversity of microbial community in the Rare Earth Elements-rich muds are limited. In this research, we conducted a characterization for the composition and diversity of bacterial and archaeal communities from rare earth elements-rich gravity core sediment at approximately 4800 meters deep in the Indian Ocean by Illumina high-throughput sequencing targeting 16S rRNA genes. The results showed that the most abundant bacteria were Proteobacteria, followed by Firmic ...[more]

PMID: 30557300

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