Browse
Submit Data
Databases
API
Help

Dataset Information

35 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Phylogeographic Analysis of African Swine Fever Virus, Western Europe, 2018.

ABSTRACT: In September 2018, African swine fever in wild boars was detected in Belgium. We used African swine fever-infected spleen samples to perform a phylogenetic analysis of the virus. The causative strain belongs to genotype II, and its closest relatives are viruses previously isolated in Ukraine, Belarus, Estonia, and European Russia.

SUBMITTER: Garigliany M

PROVIDER: S-EPMC6302608 | biostudies-literature |

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Similar Datasets

Molecular Characterization of African Swine Fever Virus, China, 2018.

Project description:On August 3, 2018, an outbreak of African swine fever in pigs was reported in China. We subjected a virus from an African swine fever-positive pig sample to phylogenetic analysis. This analysis showed that the causative strain belonged to the p72 genotype II and CD2v serogroup 8.

| S-EPMC6199985 | biostudies-literature

African swine fever virus Belgium 2018/1

Project description:Full genome sequence of African swine fever virus Belgium2018/1

| PRJEB31287 | ENA

Comparative Analysis of Whole-Genome Sequence of African Swine Fever Virus Belgium 2018/1.

Project description:We analyzed the whole-genome sequence of African swine fever virus Belgium 2018/1. The strain fits into the European genotype II (>99.98% identity). The high-coverage sequence revealed 15 differences compared with an improved African swine fever virus Georgia 2007/1 sequence. However, in the absence of genetic markers, no spatial or temporal correlations could be defined.

| S-EPMC6537744 | biostudies-literature

African swine fever virus

Project description:African swine fever virus Raw sequence reads

| PRJNA658205 | ENA

African swine fever virus

Project description:African swine fever virus Genome sequencing and assembly

| PRJNA559072 | ENA

African swine fever virus

Project description:African swine fever virus Genome sequencing and assembly

| PRJNA1007294 | ENA

African swine fever virus

Project description:African swine fever virus Genome sequencing