Dataset Information

Explorative Data Analysis of Drosophila suzukii Trap Catches from a Seven-Year Monitoring Program in Southwest Germany.

ABSTRACT: Over the last decade, Drosophila suzukii Matsumura, an invasive pest of soft-skinned fruits, gradually established itself in Europe, often resulting in significant economic losses. In 2011, when D. suzukii was first described for Germany, the Julius Kühn Institut (JKI) started a monitoring program in southwest Germany to study the occurrence and activity of the fly. Capture data from late 2011?early 2018 from 100 traps were analyzed for the effect of weather and immediate habitat on trap captures at different times of the year. We identified five phases in the annual population development cycle of D. suzukii. We found that the mild winter of 2013/2014 helped the thorough establishment of D. suzukii in Germany. Habitat types in the immediate vicinity of the trap and local weather conditions had a strong influence on trap captures. Forest borders and hedges were found to provide adequate overwintering shelter for the flies. Trap captures in forests and hedges were generally higher than those of vineyards and orchards, even during the fruiting seasons. Summer capture rates were correlated with the number of heat days and precipitation. We also discuss briefly the limitations of using trap captures as representative of fly density in the field.

SUBMITTER: Briem F

PROVIDER: S-EPMC6315382 | biostudies-literature | 2018 Sep

REPOSITORIES: biostudies-literature

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Explorative Data Analysis of Drosophila suzukii Trap Catches from a Seven-Year Monitoring Program in Southwest Germany.

Briem Felix F Dominic Anto Raja AR Golla Burkhard B Hoffmann Christoph C Englert Camilla C Herz Annette A Vogt Heidrun H

Insects 20180924 4

Over the last decade, Drosophila suzukii Matsumura, an invasive pest of soft-skinned fruits, gradually established itself in Europe, often resulting in significant economic losses. In 2011, when D. suzukii was first described for Germany, the Julius Kühn Institut (JKI) started a monitoring program in southwest Germany to study the occurrence and activity of the fly. Capture data from late 2011⁻early 2018 from 100 traps were analyzed for the effect of weather and immediate habitat o ...[more]

PMID: 30249994

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Project description:BACKGROUND:Biodiversity patterns are inherently complex and difficult to comprehensively assess. Yet, deciphering shifts in species composition through time and space are crucial for efficient and successful management of ecosystem services, as well as for predicting change. To better understand species diversity patterns, Germany participated in the Global Malaise Trap Program, a world-wide collection program for arthropods using this sampling method followed by their DNA barcode analysis. Traps were deployed at two localities: "Nationalpark Bayerischer Wald" in Bavaria, the largest terrestrial Natura 2000 area in Germany, and the nature conservation area Landskrone, an EU habitats directive site in the Rhine Valley. Arthropods were collected from May to September to track shifts in the taxonomic composition and temporal succession at these locations. NEW INFORMATION:In total, 37,274 specimens were sorted and DNA barcoded, resulting in 5,301 different genetic clusters (BINs, Barcode Index Numbers, proxy for species) with just 7.6% of their BINs shared. Accumulation curves for the BIN count versus the number of specimens analyzed suggest that about 63% of the potential diversity at these sites was recovered with this single season of sampling. Diversity at both sites rose from May (496 & 565 BINs) to July (1,236 & 1,522 BINs) before decreasing in September (572 & 504 BINs). Unambiguous species names were assigned to 35% of the BINs (1,868) which represented 12,640 specimens. Another 7% of the BINs (386) with 1,988 specimens were assigned to genus, while 26% (1,390) with 12,092 specimens were only placed to a family. These results illustrate how a comprehensive DNA barcode reference library can identify unknown specimens, but also reveal how this potential is constrained by gaps in the quantity and quality of records in BOLD, especially for Hymenoptera and Diptera. As voucher specimens are available for morphological study, we invite taxonomic experts to assist in the identification of unnamed BINs.

Dataset Information

Explorative Data Analysis of Drosophila suzukii Trap Catches from a Seven-Year Monitoring Program in Southwest Germany.

Publications

Explorative Data Analysis of <i>Drosophila suzukii</i> Trap Catches from a Seven-Year Monitoring Program in Southwest Germany.

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