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Gene expression profiles of the meniscus avascular phenotype: A guide for meniscus tissue engineering.


ABSTRACT: Avascular (Avas) meniscus regeneration remains a challenge, which is partly a consequence of our limited knowledge of the cells that maintain this tissue region. In this study, we utilized microarrays to characterize gene expression profiles of intact human Avas meniscus tissue and of cells following culture expansion. Using these data, we examined various 3D culture conditions to redifferentiate Avas cells toward the tissue phenotype. RNA was isolated from either the tissue directly or following cell isolation and 2 weeks in monolayer culture. RNA was hybridized on human genome arrays. Differentially expressed (DE) genes were identified by ranking analysis. DAVID pathway analysis was performed and visualized using STRING analysis. Quantitative PCR (qPCR) on additional donor menisci (tissues and cells) were used to validate array data. Avas cells cultured in 3D were subjected to qPCR to compare with the array-generated data. A total of 387 genes were DE based on differentiation state (>3-fold change; p?

SUBMITTER: Grogan SP 

PROVIDER: S-EPMC6326361 | biostudies-literature | 2018 Jul

REPOSITORIES: biostudies-literature

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Gene expression profiles of the meniscus avascular phenotype: A guide for meniscus tissue engineering.

Grogan Shawn P SP   Duffy Stuart F SF   Pauli Chantal C   Lotz Martin K MK   D'Lima Darryl D DD  

Journal of orthopaedic research : official publication of the Orthopaedic Research Society 20180314 7


Avascular (Avas) meniscus regeneration remains a challenge, which is partly a consequence of our limited knowledge of the cells that maintain this tissue region. In this study, we utilized microarrays to characterize gene expression profiles of intact human Avas meniscus tissue and of cells following culture expansion. Using these data, we examined various 3D culture conditions to redifferentiate Avas cells toward the tissue phenotype. RNA was isolated from either the tissue directly or followin  ...[more]

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