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TCF/LEF dependent and independent transcriptional regulation of Wnt/?-catenin target genes.


ABSTRACT: During canonical Wnt signalling, the activity of nuclear ?-catenin is largely mediated by the TCF/LEF family of transcription factors. To challenge this view, we used the CRISPR/Cas9 genome editing approach to generate HEK 293T cell clones lacking all four TCF/LEF genes. By performing unbiased whole transcriptome sequencing analysis, we found that a subset of ?-catenin transcriptional targets did not require TCF/LEF factors for their regulation. Consistent with this finding, we observed in a genome-wide analysis that ?-catenin occupied specific genomic regions in the absence of TCF/LEF Finally, we revealed the existence of a transcriptional activity of ?-catenin that specifically appears when TCF/LEF factors are absent, and refer to this as ?-catenin-GHOST response. Collectively, this study uncovers a previously neglected modus operandi of ?-catenin that bypasses the TCF/LEF transcription factors.

SUBMITTER: Doumpas N 

PROVIDER: S-EPMC6331726 | biostudies-literature | 2019 Jan

REPOSITORIES: biostudies-literature

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TCF/LEF dependent and independent transcriptional regulation of Wnt/β-catenin target genes.

Doumpas Nikolaos N   Lampart Franziska F   Robinson Mark D MD   Lentini Antonio A   Nestor Colm E CE   Cantù Claudio C   Basler Konrad K  

The EMBO journal 20181113 2


During canonical Wnt signalling, the activity of nuclear β-catenin is largely mediated by the TCF/LEF family of transcription factors. To challenge this view, we used the CRISPR/Cas9 genome editing approach to generate HEK 293T cell clones lacking all four TCF/LEF genes. By performing unbiased whole transcriptome sequencing analysis, we found that a subset of β-catenin transcriptional targets did not require TCF/LEF factors for their regulation. Consistent with this finding, we observed in a gen  ...[more]

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