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ABSTRACT: Background
We introduce BPG, a framework for generating publication-quality, highly-customizable plots in the R statistical environment.Results
This open-source package includes multiple methods of displaying high-dimensional datasets and facilitates generation of complex multi-panel figures, making it suitable for complex datasets. A web-based interactive tool allows online figure customization, from which R code can be downloaded for integration with computational pipelines.Conclusion
BPG provides a new approach for linking interactive and scripted data visualization and is available at http://labs.oicr.on.ca/boutros-lab/software/bpg or via CRAN at https://cran.r-project.org/web/packages/BoutrosLab.plotting.general.
SUBMITTER: P'ng C
PROVIDER: S-EPMC6341661 | biostudies-literature | 2019 Jan
REPOSITORIES: biostudies-literature
P'ng Christine C Green Jeffrey J Chong Lauren C LC Waggott Daryl D Prokopec Stephenie D SD Shamsi Mehrdad M Nguyen Francis F Mak Denise Y F DYF Lam Felix F Albuquerque Marco A MA Wu Ying Y Jung Esther H EH Starmans Maud H W MHW Chan-Seng-Yue Michelle A MA Yao Cindy Q CQ Liang Bianca B Lalonde Emilie E Haider Syed S Simone Nicole A NA Sendorek Dorota D Chu Kenneth C KC Moon Nathalie C NC Fox Natalie S NS Grzadkowski Michal R MR Harding Nicholas J NJ Fung Clement C Murdoch Amanda R AR Houlahan Kathleen E KE Wang Jianxin J Garcia David R DR de Borja Richard R Sun Ren X RX Lin Xihui X Chen Gregory M GM Lu Aileen A Shiah Yu-Jia YJ Zia Amin A Kearns Ryan R Boutros Paul C PC
BMC bioinformatics 20190121 1
<h4>Background</h4>We introduce BPG, a framework for generating publication-quality, highly-customizable plots in the R statistical environment.<h4>Results</h4>This open-source package includes multiple methods of displaying high-dimensional datasets and facilitates generation of complex multi-panel figures, making it suitable for complex datasets. A web-based interactive tool allows online figure customization, from which R code can be downloaded for integration with computational pipelines.<h4 ...[more]