Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

High-Quality Draft Genome Sequence of Pseudomonas reidholzensis Strain CCOS 865T.

ABSTRACT: We have sequenced and assembled the genome of Pseudomonas reidholzensis CCOS 865T, which was isolated in 2014 from forest soil. Members of the genus Pseudomonas play important roles in environmental systems and are utilized in many biotechnological processes. The genome of this species may provide an important resource for the discovery of novel enzyme activities.

SUBMITTER: Rutz D

PROVIDER: S-EPMC6346167 | biostudies-literature | 2019 Jan

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

High-Quality Draft Genome Sequence of Pseudomonas reidholzensis Strain CCOS 865<sup>T</sup>.

Rutz Dominik D Frasson David D Sievers Martin M Blom Jochen J Rezzonico Fabio F Pothier Joël F JF Smits Theo H M THM

Microbiology resource announcements 20190117 3

We have sequenced and assembled the genome of Pseudomonas reidholzensis CCOS 865<sup>T</sup>, which was isolated in 2014 from forest soil. Members of the genus Pseudomonas play important roles in environmental systems and are utilized in many biotechnological processes. The genome of this species may provide an important resource for the discovery of novel enzyme activities. ...[more]

PMID: 30687835

Similar Datasets

High-Quality Draft Genome Sequence of Curtobacterium sp. Strain Ferrero.

Project description:Here, we present the high-quality draft genome sequence of Curtobacterium sp. strain Ferrero, an actinobacterium belonging to a novel species isolated as an environmental contaminant in a bacterial cell culture. The assembled genome of 3,694,888 bp in 49 contigs has a G+C content of 71.6% and contains 3,516 predicted genes.

| S-EPMC5722072 | biostudies-other

High-Quality Draft Genome Sequence of Pseudomonas wadenswilerensis CCOS 864T.

Project description:Pseudomonas wadenswilerensis CCOS 864T was isolated in 2014 from forest soil. The organism belongs taxonomically to the Pseudomonas putida group, members of which have been well studied for their potential in biotechnological applications. We present here the draft genome sequence of P. wadenswilerensis CCOS 864T.

| S-EPMC6256571 | biostudies-literature

Improved High-Quality Draft Genome Sequence of Pseudomonas fluorescens KENGFT3.

Project description:Pseudomonas sp. strain KENGFT3 inhibits the growth of Phytophthora infestans and is a potentially useful biopesticide for plant diseases, including potato late blight. We sequenced the 6.2-Mbp genome of this strain and assembled it into a single scaffold with 9 contigs. KENGFT3 is related to previously sequenced strains of P. fluorescens.

| S-EPMC4882946 | biostudies-literature

Draft Genome Sequence of Pseudomonas veronii Strain 1YdBTEX2.

Project description:Pseudomonas veronii strain 1YdBTEX2 was isolated from a benzene-contaminated site. Here we report the draft genome sequence of 1YdBTEX2 and its genes associated with aromatic metabolism. The broad catabolic potential of this strain is consistent with the environment from which it was isolated.

| S-EPMC3656214 | biostudies-literature

High quality draft genome sequence of the type strain of Pseudomonas lutea OK2(T), a phosphate-solubilizing rhizospheric bacterium.

Project description:Pseudomonas lutea OK2(T) (=LMG 21974(T), CECT 5822(T)) is the type strain of the species and was isolated from the rhizosphere of grass growing in Spain in 2003 based on its phosphate-solubilizing capacity. In order to identify the functional significance of phosphate solubilization in Pseudomonas Plant growth promoting rhizobacteria, we describe here the phenotypic characteristics of strain OK2(T) along with its high-quality draft genome sequence, its annotation, and analysis. The genome is comprised of 5,647,497 bp with 60.15 % G + C content. The sequence includes 4,846 protein-coding genes and 95 RNA genes.

| S-EPMC4994261 | biostudies-literature

Draft genome sequence of Pseudomonas aeruginosa strain ATCC 27853.

Project description:Pseudomonas aeruginosa is a common bacterium that can cause disease. The versatility of Pseudomonas aeruginosa enables the organism to infect damaged tissues or those with reduced immunity which cause inflammation and sepsis. Here we report the genome sequence of the strain ATCC 27853.

| S-EPMC3393497 | biostudies-literature

Draft Genome Sequence of Pseudomonas aeruginosa Strain PA14-UM.

Project description:Pseudomonas aeruginosa is a Gram-negative nosocomial pathogen that is a leading cause of morbidity and mortality in cystic fibrosis patients and immunocompromised individuals worldwide. The isolate examined in this study, PA14-UM, is a well-characterized isolate utilized in studies from the University of Maryland.

| S-EPMC7660996 | biostudies-literature

High-Quality Draft Genome Sequence of Francisella tularensis subsp. holarctica Strain OR96-0246.

Project description:The bacterial pathogen Francisella tularensis was recently renewed as a tier-one select agent. F. tularensis subsp. tularensis (type A) and holarctica (type B) are of clinical relevance. Here, we report the complete genome of a virulent F. tularensis type B strain and describe its usefulness in comparative genomics.

| S-EPMC4536685 | biostudies-literature

Draft Genome Sequence of Mercury-Resistant Pseudomonas putida Strain DRA525.

Project description:We report here the draft genome sequence of Pseudomonas putida strain DRA525, isolated from mercury-contaminated soil. This strain shows resistance to mercury and multiple antibiotics, and its genome sequence contains several gene sets known to confer resistance to heavy metals enzymatically and through multidrug efflux pumps.

| S-EPMC5940961 | biostudies-literature

High-Quality draft genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain CJ3Sym.

Project description:Mesorhizobium loti strain CJ3Sym was isolated in 1998 following transfer of the integrative and conjugative element ICEMlSym(R7A), also known as the R7A symbiosis island, in a laboratory mating from the donor M. loti strain R7A to a nonsymbiotic recipient Mesorhizobium strain CJ3. Strain CJ3 was originally isolated from a field site in the Rocklands range in New Zealand in 1994. CJ3Sym is an aerobic, Gram-negative, non-spore-forming rod. This report reveals the genome of M. loti strain CJ3Sym currently comprises 70 scaffolds totaling 7,563,725 bp. The high-quality draft genome is arranged in 70 scaffolds of 71 contigs, contains 7,331 protein-coding genes and 70 RNA-only encoding genes, and is part of the GEBA-RNB project proposal.

| S-EPMC4572658 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data