Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Draft Genome Sequences of Penicillium spp. from Deeply Buried Oligotrophic Marine Sediments.

ABSTRACT: Here, we report genome sequences of two Penicillium isolates from below the seafloor of the oligotrophic South Pacific Gyre. These genomes are the first reported for fungi from deeply buried marine sediment. Both genomes will provide valuable information regarding the role of fungi and carbon cycling in the energy-limited subsurface biosphere.

SUBMITTER: Sobol MS

PROVIDER: S-EPMC6368660 | biostudies-literature | 2019 Feb

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Draft Genome Sequences of Penicillium spp. from Deeply Buried Oligotrophic Marine Sediments.

Sobol Morgan S MS Hoshino Tatsuhiko T Futagami Taiki T Inagaki Fumio F Kiel Reese Brandi B

Microbiology resource announcements 20190207 6

Here, we report genome sequences of two Penicillium isolates from below the seafloor of the oligotrophic South Pacific Gyre. These genomes are the first reported for fungi from deeply buried marine sediment. Both genomes will provide valuable information regarding the role of fungi and carbon cycling in the energy-limited subsurface biosphere. ...[more]

PMID: 30746525

Similar Datasets

Draft Genome Sequences of Three Streptomycetes Isolated from Frobisher Bay Marine Sediments.

Project description:Three Streptomyces strains (RKAG290, RKAG293, and RKAG337) were isolated from intertidal marine sediments of Frobisher Bay (Canada).

| S-EPMC9584204 | biostudies-literature

Genome Sequences of Two Choline-Utilizing Methanogenic Archaea, Methanococcoides spp., Isolated from Marine Sediments.

Project description:The genomes of two Methanococcoides spp. that were isolated from marine sediments and are capable of carrying out methanogenesis from choline and other methylotrophic substrates were sequenced. The average nucleotide identity and in silico DNA-DNA hybridization analyses demonstrate that they represent species different from those previously described.

| S-EPMC6498239 | biostudies-literature

Draft Genome Sequences of Two Bacillus spp. and an Oceanobacillus sp. Strain Isolated from Marine Macroalgae.

Project description:We present the draft genome sequences of Bacillus flexus strain DMTMMB08, Bacillus licheniformis strain DMTMMB10, and Oceanobacillus picturae strain DMTMMB24, isolated from marine macroalgae.

| S-EPMC6376419 | biostudies-literature

Draft genome sequences of the strains isolated from estuary sediments.

Project description:Draft genome sequences of four strains of the Bacillaceae were generated using nanopore technology. The size of the genome ranges from 4.2 to 4.4 Mb. This study aims to enhance our understanding of the diversity of probable probiotic strains, their metabolic activities, and their safety in real-world applications.

| S-EPMC10720487 | biostudies-literature

Draft Genome Sequences of Pseudomonas Isolates Derived from Glyphosate-Treated Sediments.

Project description:Reported here are the genome sequences of Pseudomonas isolates that were derived from glyphosate-treated sediment microcosms. Genomes were assembled using workflows available through the Bacterial and Viral Bioinformatics Resource Center (BV-BRC). The genomes of eight Pseudomonas isolates were sequenced, with genomes ranging from 5.9 to 6.3 Mb.

| S-EPMC10190700 | biostudies-literature

Draft Genome Sequences of Sulfurovum spp. TSL1 and TSL6, Two Sulfur-Oxidizing Bacteria Isolated from Marine Sediment.

Project description:Sulfurovum spp. TSL1 and TSL6 are sulfur-oxidizing chemolithoautotrophic bacteria isolated from the tsunami-launched marine sediment in the Great East Japan earthquake. This announcement describes the draft genome sequences of the two isolates that possess the gene sets for the sulfur oxidation pathway.

| S-EPMC8759385 | biostudies-literature

Draft Genome Sequences of Marine Flavobacterium Algibacter lectus Strains SS8 and NR4.

Project description:Here, we present the draft genome sequences of a zeaxanthin-producing flavobacterium, Algibacter lectus strains SS8 and NR4, isolated from coastal sediment and rock surfaces in Hakodate, Japan, respectively. This genomic information represents the first Algibacter genome sequences, which will help us to elucidate the biology and evolution of Flavobacteriaceae bacteria.

| S-EPMC4241666 | biostudies-other

Draft Genome Sequence of Strain LSUCC0112, a Gulf of Mexico Representative of the Oligotrophic Marine Gammaproteobacteria.

Project description:Here, we present the draft genome sequence of strain LSUCC0112, a cultured representative from the Gulf of Mexico that is phylogenetically close to the OM182 clade within oligotrophic marine Gammaproteobacteria LSUCC0112 shows the potential for aerobic heterotrophy, glycogen synthesis, flagellar motility, and assimilatory sulfate reduction.

| S-EPMC6606908 | biostudies-literature

IMA genome - F14 : Draft genome sequences of Penicillium roqueforti, Fusarium sororula, Chrysoporthe puriensis, and Chalaropsis populi.

Project description:Draft genomes of Penicillium roqueforti, Fusarium sororula, Chalaropsis populi, and Chrysoporthe puriensis are presented. Penicillium roqueforti is a model fungus for genetics, physiological and metabolic studies, as well as for biotechnological applications. Fusarium sororula and Chrysoporthe puriensis are important tree pathogens, and Chalaropsis populi is a soil-borne root-pathogen. The genome sequences presented here thus contribute towards a better understanding of both the pathogenicity and biotechnological potential of these species.

| S-EPMC7934431 | biostudies-literature

Draft Genome Sequence of Two Marine Plantactinospora spp. from the Gulf of California.

Project description:Plantactinospora sp. strains BB1 and BC1 were isolated in 2009 from sediment samples of the Gulf of California from among almost 300 actinobacteria. Genome mining of their ?8.5-Mb sequences showed the bioprospecting potential of these rare actinomycetes, providing an insight to their ecological and biotechnological importance.

| S-EPMC5968735 | biostudies-literature