Dataset Information

Draft Genome Sequence of the Oleaginous Yeast Saitozyma podzolica (syn. Cryptococcus podzolicus) DSM 27192.

ABSTRACT: We report here the draft genome of Saitozyma podzolica DSM 27192 sequenced based on PacBio chemistry. This yeast isolate produces large amounts of single-cell oil (SCO) and gluconic acid (GA). Information from the genome sequence will provide additional insight into the genetic mechanism of SCO and GA metabolism in this organism.

SUBMITTER: Aliyu H

PROVIDER: S-EPMC6386573 | biostudies-literature | 2019 Feb

REPOSITORIES: biostudies-literature

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Publications

Draft Genome Sequence of the Oleaginous Yeast <i>Saitozyma podzolica</i> (syn. <i>Cryptococcus podzolicus</i>) DSM 27192.

Aliyu Habibu H Gorte Olga O Neumann Anke A Ochsenreither Katrin K

Microbiology resource announcements 20190221 8

We report here the draft genome of Saitozyma podzolica DSM 27192 sequenced based on PacBio chemistry. This yeast isolate produces large amounts of single-cell oil (SCO) and gluconic acid (GA). Information from the genome sequence will provide additional insight into the genetic mechanism of SCO and GA metabolism in this organism. ...[more]

PMID: 30834372

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Project description:Single cell oil (SCO) produced by oleaginous yeasts is considered as a sustainable source for biodiesel and oleochemicals since its production does not compete with food or feed and high yields can be obtained from a wide variety of carbon sources, e.g., acetate or lignocellulose. Downstream processing is still costly preventing the broader application of SCO. Direct transesterification of freeze-dried biomass is widely used for analytical purposes and for biodiesel production but it is energy intensive and, therefore, expensive. Additionally, only fatty acid esters are produced limiting the subsequent applications. The harsh conditions applied during direct esterification might also damage high-value polyunsaturated fatty acids. Unfortunately, universal downstream strategies effective for all yeast species do not exist and methods have to be developed for each yeast species due to differences in cell wall composition. Therefore, the aim of this study was to evaluate three industrially relevant cell disruption methods combined with three extraction systems for the SCO extraction of two novel, unconventional oleaginous yeasts, Saitozyma podzolica DSM 27192 and Apiotrichum porosum DSM 27194, based on cell disruption efficiency, lipid yield, and oil quality. Bead milling (BM) and high pressure homogenization (HPH) were effective cell disruption methods in contrast to sonification. By combining HPH (95% cell disruption efficiency) with ethanol-hexane-extraction 46.9 ± 4.4% lipid/CDW of S. podzolica were obtained which was 2.7 times higher than with the least suitable combination (ultrasound + Folch). A. porosum was less affected by cell disruption attempts. Here, the highest disruption efficiency was 74% after BM and the most efficient lipid recovery method was direct acidic transesterification (27.2 ± 0.5% fatty acid methyl esters/CDW) after freeze drying. The study clearly indicates cell disruption is the decisive step for SCO extraction. At disruption efficiencies of >90%, lipids can be extracted at high yields, whereas at lower cell disruption efficiencies, considerable amounts of lipids will not be accessible for extraction regardless of the solvents used. Furthermore, it was shown that hexane-ethanol which is commonly used for extraction of algal lipids is also highly efficient for yeasts.

Dataset Information

Draft Genome Sequence of the Oleaginous Yeast Saitozyma podzolica (syn. Cryptococcus podzolicus) DSM 27192.

Publications

Draft Genome Sequence of the Oleaginous Yeast <i>Saitozyma podzolica</i> (syn. <i>Cryptococcus podzolicus</i>) DSM 27192.

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