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Molecular phylogeny provides new insights on the taxonomy and composition of Lyperosomum Looss, 1899 (Digenea, Dicrocoeliidae) and related genera.

ABSTRACT: Lyperosomum Looss, 1899 is one of the largest genera of the Dicrocoeliidae and is one of the best examples of the systematic complexity and taxonomic instability within this family. We present the molecular analyses based on novel sequences of nuclear and mitochondrial genes obtained from 56 isolates of adult flukes and larval stages of dicrocoeliids belonging to Lyperosomum, Skrjabinus, Zonorchis as well as previously available sequence data. According to obtained results we propose to return Zonorchis clathratus and Z. petiolatus into Lyperosomum, and to recognize L. alagesi as a synonym of L. petiolatum. Our study shows that L. petiolatum commonly occurs in Europe in corvids as well as in several species of migratory songbirds, e.g. Sylvia atricapilla. At the same time, the Turdidae appear to host a distinct species of Lyperosomum. The phylogenetic analysis has clearly demonstrated the paraphylepic nature of Lyperosomum and indicated the need of its thorough revision preferably using specimens from type hosts and type territories of nominal species. In addition, inclusion of numerous not yet sequenced dicrocoeliid genera into future phylogenetic studies is necessary to clarify the interrelationships of taxa within the family and stabilize its system.

SUBMITTER: Hildebrand J

PROVIDER: S-EPMC6463552 | biostudies-literature |

REPOSITORIES: biostudies-literature

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Project description:Two new species of Cephalogonimidae Looss, 1899 (from Emoleptalea Looss, 1900 and Masenia Chatterji, 1933) are described from African freshwater fishes. Emoleptalea mozambiquensis n. sp. infected the turquoise killifish, Nothobranchius furzeri Jubb, in Mozambique and differs from its nine congeners by the combination of differences in body shape and size, oral sucker shape, sucker width ratio, configuration of the digestive tract and gonads, vitelline follicle shape and vitellarium configuration. Emoleptalea dollfusi Srivastava, 1960 is a synonym of Emoleptalea loossi Srivastava, 1960, thus there are still nine accepted species. Masenia baroensis n. sp. infected the globe fish, Tetraodon lineatus L., in the Republic of Guinea and differs from its five African congeners and 15 Asian congeners by the combination of circumoral spine count, oral sucker shape, caecal extent, ovary shape, genital pore position, and configuration of the vitellarium. Masenia dayali (Gupta & Puri, 1984) Chandra & Saxena, 2016 and Masenia pushpanjalii are nomina dubia. We propose Masenia ritai (Agrawal, 1964) n. comb., with M. ritai Sircar & Sinha, 1970 its junior synonym. Heterorchis cf. crumenifer (identified tentatively due to egg size) is reported from the West African lungfish, Protopterus annectens (Owen), in Mozambique (new geographical record). Heterorchis protopteri Thomas, 1958 and Heterorchis ghanensis Thomas, 1968 are species inquirendae. Sequences (28S rDNA) from these parasites were included in a Bayesian phylogenetic analysis with 37 other ingroup taxa. Both new species formed a clade with Masenia nkomatiensis Dumbo, Dos Santos & Avenant-Oldewage, 2019 from Africa. These three species formed a sister relationship with the other available cephalogonimids: Cephalogonimus americanus Stafford, 1902 and Cephalogonimus retusus (Dujardin, 1845), both frog parasites from North America and Europe, respectively. Heterorchis cf. crumenifer represented a distinct lineage within the Plagiorchioidea but formed a polytomy with species from 10 plagiorchioid families.

Project description:BACKGROUND:The Dicrocoeliidae are digenetic trematodes mostly parasitic in the bile ducts and gall bladder of various avian and mammalian hosts. Until recently their systematics was based on morphological data only. Due to the high morphological uniformity across multiple dicrocoeliid taxa and insufficient knowledge of relative systematic value of traditionally used morphological characters, their taxonomy has always been unstable. Therefore, DNA sequence data provide a critical independent source of characters for phylogenetic inference and improvement of the system. METHODS:We examined the phylogenetic affinities of three avian dicrocoeliids representing the genera Brachylecithum, Brachydistomum and Lyperosomum, using partial sequences of the nuclear large ribosomal subunit (28S) RNA gene. We also sequenced the complete or nearly complete mitogenomes of these three isolates and conducted a comparative mitogenomic analysis with the previously available mitogenomes from three mammalian dicrocoeliids (from 2 different genera) and examined the phylogenetic position of the family Dicrocoeliidae within the order Plagiorchiida based on concatenated nucleotide sequences of all mitochondrial genes (except trnG and trnE). RESULTS:Combined nucleotide diversity, Kimura-2-parameter distance, non-synonymous/synonymous substitutions ratio and average sequence identity analyses consistently demonstrated that cox1, cytb, nad1 and two rRNAs were the most conserved and atp6, nad5, nad3 and nad2 were the most variable genes across dicrocoeliid mitogenomes. Phylogenetic analyses based on mtDNA sequences did not support the close relatedness of the Paragonimidae and Dicrocoeliidae and suggested non-monophyly of the Gorgoderoidea as currently recognized. CONCLUSIONS:Our results show that fast-evolving mitochondrial genes atp6, nad5 and nad3 would be better markers than slow-evolving genes cox1 and nad1 for species discrimination and population level studies in the Dicrocoeliidae. Furthermore, the Dicrocoeliidae being outside of the clade containing other xiphidiatan trematodes suggests a need for the re-evaluation of the taxonomic content of the Xiphidiata.

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Molecular phylogeny provides new insights on the taxonomy and composition of Lyperosomum Looss, 1899 (Digenea, Dicrocoeliidae) and related genera.

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