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Genetics of blood lipids among ~300,000 multi-ethnic participants of the Million Veteran Program.


ABSTRACT: The Million Veteran Program (MVP) was established in 2011 as a national research initiative to determine how genetic variation influences the health of US military veterans. Here we genotyped 312,571 MVP participants using a custom biobank array and linked the genetic data to laboratory and clinical phenotypes extracted from electronic health records covering a median of 10.0 years of follow-up. Among 297,626 veterans with at least one blood lipid measurement, including 57,332 black and 24,743 Hispanic participants, we tested up to around 32 million variants for association with lipid levels and identified 118 novel genome-wide significant loci after meta-analysis with data from the Global Lipids Genetics Consortium (total n?>?600,000). Through a focus on mutations predicted to result in a loss of gene function and a phenome-wide association study, we propose novel indications for pharmaceutical inhibitors targeting PCSK9 (abdominal aortic aneurysm), ANGPTL4 (type 2 diabetes) and PDE3B (triglycerides and coronary disease).

SUBMITTER: Klarin D 

PROVIDER: S-EPMC6521726 | biostudies-literature | 2018 Nov

REPOSITORIES: biostudies-literature

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Genetics of blood lipids among ~300,000 multi-ethnic participants of the Million Veteran Program.

Klarin Derek D   Damrauer Scott M SM   Cho Kelly K   Sun Yan V YV   Teslovich Tanya M TM   Honerlaw Jacqueline J   Gagnon David R DR   DuVall Scott L SL   Li Jin J   Peloso Gina M GM   Chaffin Mark M   Small Aeron M AM   Huang Jie J   Tang Hua H   Lynch Julie A JA   Ho Yuk-Lam YL   Liu Dajiang J DJ   Emdin Connor A CA   Li Alexander H AH   Huffman Jennifer E JE   Lee Jennifer S JS   Natarajan Pradeep P   Chowdhury Rajiv R   Saleheen Danish D   Vujkovic Marijana M   Baras Aris A   Pyarajan Saiju S   Di Angelantonio Emanuele E   Neale Benjamin M BM   Naheed Aliya A   Khera Amit V AV   Danesh John J   Chang Kyong-Mi KM   Abecasis Gonçalo G   Willer Cristen C   Dewey Frederick E FE   Carey David J DJ   Concato John J   Gaziano J Michael JM   O'Donnell Christopher J CJ   Tsao Philip S PS   Kathiresan Sekar S   Rader Daniel J DJ   Wilson Peter W F PWF   Assimes Themistocles L TL  

Nature genetics 20181001 11


The Million Veteran Program (MVP) was established in 2011 as a national research initiative to determine how genetic variation influences the health of US military veterans. Here we genotyped 312,571 MVP participants using a custom biobank array and linked the genetic data to laboratory and clinical phenotypes extracted from electronic health records covering a median of 10.0 years of follow-up. Among 297,626 veterans with at least one blood lipid measurement, including 57,332 black and 24,743 H  ...[more]

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