Unknown

Dataset Information

0

Automated image-analysis method for the quantification of fiber morphometry and fiber type population in human skeletal muscle.


ABSTRACT: BACKGROUND:The quantitative analysis of muscle histomorphometry has been growing in importance in both research and clinical settings. Accurate and stringent assessment of myofibers' changes in size and number, and alterations in the proportion of oxidative (type I) and glycolytic (type II) fibers is essential for the appropriate study of aging and pathological muscle, as well as for diagnosis and follow-up of muscle diseases. Manual and semi-automated methods to assess muscle morphometry in sections are time-consuming, limited to a small field of analysis, and susceptible to bias, while most automated methods have been only tested in rodent muscle. METHODS:We developed a new macro script for Fiji-ImageJ to automatically assess human fiber morphometry in digital images of the entire muscle. We tested the functionality of our method in deltoid muscle biopsies from a heterogeneous population of subjects with histologically normal muscle (male, female, old, young, lean, obese) and patients with dermatomyositis, necrotizing autoimmune myopathy, and anti-synthetase syndrome myopathy. RESULTS:Our macro is fully automated, requires no user intervention, and demonstrated improved fiber segmentation by running a series of image pre-processing steps before the analysis. Likewise, our tool showed high accuracy, as compared with manual methods, for identifying the total number of fibers (r?=?0.97, p?

SUBMITTER: Reyes-Fernandez PC 

PROVIDER: S-EPMC6537183 | biostudies-literature | 2019 May

REPOSITORIES: biostudies-literature

altmetric image

Publications

Automated image-analysis method for the quantification of fiber morphometry and fiber type population in human skeletal muscle.

Reyes-Fernandez Perla C PC   Periou Baptiste B   Decrouy Xavier X   Relaix Fréderic F   Authier François Jérôme FJ  

Skeletal muscle 20190527 1


<h4>Background</h4>The quantitative analysis of muscle histomorphometry has been growing in importance in both research and clinical settings. Accurate and stringent assessment of myofibers' changes in size and number, and alterations in the proportion of oxidative (type I) and glycolytic (type II) fibers is essential for the appropriate study of aging and pathological muscle, as well as for diagnosis and follow-up of muscle diseases. Manual and semi-automated methods to assess muscle morphometr  ...[more]

Similar Datasets

| S-EPMC8556272 | biostudies-literature
| S-EPMC5437042 | biostudies-literature
| S-EPMC7667765 | biostudies-literature
| S-EPMC7757813 | biostudies-literature
| S-EPMC4176759 | biostudies-literature
| S-EPMC9315074 | biostudies-literature
| S-EPMC3874884 | biostudies-literature
| S-EPMC3287155 | biostudies-literature
| S-EPMC11342880 | biostudies-literature
2015-07-03 | GSE70489 | GEO