Dataset Information

Profiling the Bacterial Diversity in a Typical Karst Tiankeng of China.

ABSTRACT: While karst tiankengs have a higher capacity to act as safe havens for biodiversity in changing climates, little is known about their soil microorganisms. To fill this gap, we investigate the distribution and driving factors of the bacterial community in karst tiankeng systems. There is a significant difference in the soil characteristics between the inside and the outside of a karst tiankeng. At the karst tiankeng considered in this study, the bacterial composition, in terms of the operational taxonomic unit (OTU), was found to be significantly different in different soil samples, taken from diverse sampling sites within the collapsed doline or the external area, and showed a high habitat heterogeneity. The dominant phylum abundances vary with the sampling sites and have their own indicator taxa from phylum to genus. Unlike the primary controlling factors of plant diversity, the microclimate (soil moisture and temperature), soil pH, and slope dominated the distribution of the bacterial community in karst tiankeng systems. Our results firstly showed the distribution characteristics of bacterial communities and then revealed the importance of microhabitats in predicting the microbial distribution in karst tiankeng systems.

SUBMITTER: Pu G

PROVIDER: S-EPMC6572312 | biostudies-literature | 2019 May

REPOSITORIES: biostudies-literature

ACCESS DATA

Publications

Profiling the Bacterial Diversity in a Typical Karst Tiankeng of China.

Pu Gaozhong G Lv Yanna Y Dong Lina L Zhou Longwu L Huang Kechao K Zeng Danjuan D Mo Ling L Xu Guangping G

Biomolecules 20190514 5

While karst tiankengs have a higher capacity to act as safe havens for biodiversity in changing climates, little is known about their soil microorganisms. To fill this gap, we investigate the distribution and driving factors of the bacterial community in karst tiankeng systems. There is a significant difference in the soil characteristics between the inside and the outside of a karst tiankeng. At the karst tiankeng considered in this study, the bacterial composition, in terms of the operational ...[more]

PMID: 31091762

Similar Datasets

Project description:Karst rocky desertification is one of the main causes of habitat fragmentation in Southwest China. Guizhou Province is located in the center of the karst area in southern China and is a typical karst ecological environment fragile area. Many studies have shown that habitat fragmentation is the main factor leading to the loss of biodiversity and species extinction, and it is also one of the important factors that threaten the survival of natural organisms. This study initially explored the habitat fragmentation degree, species diversity, and genetic diversity of leafhoppers in three typical karst areas in Guizhou. The study was combined with the general situation of the study area, understanding the main factors affecting habitat fragmentation, and putting forward reasonable protection suggestions for species resources. Based on satellite imagery, field survey collection, molecular sequencing data, and related index measurement methods, we measured the habitat fragmentation degree, species diversity index, and genetic diversity index of Erythroneurine leafhoppers of Shibing Yuntai Mountain Nature Reserve, Bijie Salaxi Demonstration Zone, Zhenfeng-Huajiang Demonstration Zone. Moreover, we compared the differences in the three study areas, carried out correlation analysis with relevant environmental factors, and discussed the main factors that formed the results. The results of the study show that the species diversity and genetic diversity of Erythroneurine leafhoppers in the study areas are affected by habitat fragmentation, and the weaker the degree of habitat fragmentation in the region, the higher the species diversity and genetic diversity, which is specifically manifested in species, quantity, and gene-flow. Understanding the status of biodiversity in karst areas is conducive to the sustainable development of biological resources. In order to better protect the diversity of such insects and their host plants and other biological diversity, combined with the background of the research area, we propose corresponding protection measures for reference.

Dataset Information

Profiling the Bacterial Diversity in a Typical Karst Tiankeng of China.

Publications

Profiling the Bacterial Diversity in a Typical Karst Tiankeng of China.

Similar Datasets

OmicsDI is part of the ELIXIR infrastructure

Tweets