Dataset Information

Elucidating the genetic basis of biomass accumulation and radiation use efficiency in spring wheat and its role in yield potential.

ABSTRACT: One of the major challenges for plant scientists is increasing wheat (Triticum aestivum) yield potential (YP). A significant bottleneck for increasing YP is achieving increased biomass through optimization of radiation use efficiency (RUE) along the crop cycle. Exotic material such as landraces and synthetic wheat has been incorporated into breeding programmes in an attempt to alleviate this; however, their contribution to YP is still unclear. To understand the genetic basis of biomass accumulation and RUE, we applied genome-wide association study (GWAS) to a panel of 150 elite spring wheat genotypes including many landrace and synthetically derived lines. The panel was evaluated for 31 traits over 2 years under optimal growing conditions and genotyped using the 35K wheat breeders array. Marker-trait association identified 94 SNPs significantly associated with yield, agronomic and phenology-related traits along with RUE and final biomass (BM_PM) at various growth stages that explained 7%-17% of phenotypic variation. Common SNP markers were identified for grain yield, BM_PM and RUE on chromosomes 5A and 7A. Additionally, landrace and synthetic derivative lines showed higher thousand grain weight (TGW), BM_PM and RUE but lower grain number (GM2) and harvest index (HI). Our work demonstrates the use of exotic material as a valuable resource to increase YP. It also provides markers for use in marker-assisted breeding to systematically increase BM_PM, RUE and TGW and avoid the TGW/GM2 and BM_PM/HI trade-off. Thus, achieving greater genetic gains in elite germplasm while also highlighting genomic regions and candidate genes for further study.

SUBMITTER: Molero G

PROVIDER: S-EPMC6576103 | biostudies-literature | 2019 Jul

REPOSITORIES: biostudies-literature

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Elucidating the genetic basis of biomass accumulation and radiation use efficiency in spring wheat and its role in yield potential.

Molero Gemma G Joynson Ryan R Pinera-Chavez Francisco J FJ Gardiner Laura-Jayne LJ Rivera-Amado Carolina C Hall Anthony A Reynolds Matthew P MP

Plant biotechnology journal 20190115 7

One of the major challenges for plant scientists is increasing wheat (Triticum aestivum) yield potential (YP). A significant bottleneck for increasing YP is achieving increased biomass through optimization of radiation use efficiency (RUE) along the crop cycle. Exotic material such as landraces and synthetic wheat has been incorporated into breeding programmes in an attempt to alleviate this; however, their contribution to YP is still unclear. To understand the genetic basis of biomass accumulat ...[more]

PMID: 30549213

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Project description:In order to make clear the recent status and trend of wheat (Triticum aestivum L.) production in China, datasets from multiple field experiments and published literature were collected to study the agronomic characteristics related to grain yield, fertilizer application and nutrient use efficiency from the year 2000 to 2011. The results showed that the mean grain yield of wheat in 2000-2011 was 5950 kg/ha, while the N, P2O5 and K2O application rates were 172, 102 and 91 kg/ha on average, respectively. The decrease in N and P2O5 and increase in K2O balanced the nutrient supply and was the main reason for yield increase. The partial factor productivity (PFP, kg grain yield produced per unit of N, P2O5 or K2O applied) values of N (PFP-N), P (PFP-P) and K (PFP-K) were in the ranges of 29.5~39.6, 43.4~74.9 and 44.1~76.5 kg/kg, respectively. While PFP-N showed no significant changes from 2000 to 2010, both PFP-P and PFP-K showed an increased trend over this period. The mean agronomic efficiency (AE, kg grain yield increased per unit of N, P2O5 or K2O applied) values of N (AEN), P (AEP) and K (AEK) were 9.4, 10.2 and 6.5 kg/kg, respectively. The AE values demonstrated marked inter-annual fluctuations, with the amplitude of fluctuation for AEN greater than those for AEP and AEK. The mean fertilizer recovery efficiency (RE, the fraction of nutrient uptake in aboveground plant dry matter to the nutrient of fertilizer application) values of N, P and K in the aboveground biomass were 33.1%, 24.3% and 28.4%, respectively. It was also revealed that different wheat ecological regions differ greatly in wheat productivity, fertilizer application and nutrient use efficiency. In summary, it was suggested that best nutrient management practices, i.e. fertilizer recommendation applied based on soil testing or yield response, with strategies to match the nutrient input with realistic yield and demand, or provided with the 4R's nutrient management (right time, right rate, right site and right fertilizer) should be adopted widely to improve the yield production and nutrient use efficiency.

Project description:The North China Plain is one of the most important grain production regions in China, but is facing serious water shortages. To achieve a balance between water use and the need for food self-sufficiency, new water efficient irrigation strategies need to be developed that balance water use with farmer net return. The Crop Environment Resource Synthesis Wheat (CERES-Wheat model) was calibrated and evaluated with two years of data which consisted of 3-4 irrigation treatments, and the model was used to investigate long-term winter wheat productivity and water use from irrigation management in the North China Plain. The calibrated model simulated accurately above-ground biomass, grain yield and evapotranspiration of winter wheat in response to irrigation management. The calibrated model was then run using weather data from 1994-2016 in order to evaluate different irrigation strategies. The simulated results using historical weather data showed that grain yield and water use was sensitive to different irrigation strategies including amounts and dates of irrigation applications. The model simulated the highest yield when irrigation was applied at jointing (T9) in normal and dry rainfall years, and gave the highest simulated yields for irrigation at double ridge (T8) in wet years. A single simulated irrigation at jointing (T9) produced yields that were 88% compared to using a double irrigation treatment at T1 and T9 in wet years, 86% of that in normal years, and 91% of that in dry years. A single irrigation at jointing or double ridge produced higher water use efficiency because it obtained higher evapotranspiration. The simulated farmer irrigation practices produced the highest yield and net income. When the cost of water was taken into account, limited irrigation was found to be more profitable based on assumptions about future water costs. In order to increase farmer income, a subsidy will likely be needed to compensate farmers for yield reductions due to water savings. These results showed that there is a cost to the farmer for water conservation, but limiting irrigation to a single irrigation at jointing would minimize impact on farmer net return in North China Plain.

Dataset Information

Elucidating the genetic basis of biomass accumulation and radiation use efficiency in spring wheat and its role in yield potential.

Publications

Elucidating the genetic basis of biomass accumulation and radiation use efficiency in spring wheat and its role in yield potential.

Similar Datasets

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