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The EMBL-EBI search and sequence analysis tools APIs in 2019.

ABSTRACT: The EMBL-EBI provides free access to popular bioinformatics sequence analysis applications as well as to a full-featured text search engine with powerful cross-referencing and data retrieval capabilities. Access to these services is provided via user-friendly web interfaces and via established RESTful and SOAP Web Services APIs (https://www.ebi.ac.uk/seqdb/confluence/display/JDSAT/EMBL-EBI+Web+Services+APIs+-+Data+Retrieval). Both systems have been developed with the same core principles that allow them to integrate an ever-increasing volume of biological data, making them an integral part of many popular data resources provided at the EMBL-EBI. Here, we describe the latest improvements made to the frameworks which enhance the interconnectivity between public EMBL-EBI resources and ultimately enhance biological data discoverability, accessibility, interoperability and reusability.

SUBMITTER: Madeira F

PROVIDER: S-EPMC6602479 | biostudies-literature | 2019 Jul

REPOSITORIES: biostudies-literature

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The EMBL-EBI search and sequence analysis tools APIs in 2019.

Madeira Fábio F Park Young Mi YM Lee Joon J Buso Nicola N Gur Tamer T Madhusoodanan Nandana N Basutkar Prasad P Tivey Adrian R N ARN Potter Simon C SC Finn Robert D RD Lopez Rodrigo R

Nucleic acids research 20190701 W1

The EMBL-EBI provides free access to popular bioinformatics sequence analysis applications as well as to a full-featured text search engine with powerful cross-referencing and data retrieval capabilities. Access to these services is provided via user-friendly web interfaces and via established RESTful and SOAP Web Services APIs (https://www.ebi.ac.uk/seqdb/confluence/display/JDSAT/EMBL-EBI+Web+Services+APIs+-+Data+Retrieval). Both systems have been developed with the same core principles that al ...[more]

PMID: 30976793

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EMBL-EBI

Project description:Organisation EGAO00000000183

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The EMBL Nucleotide Sequence Database.

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The EMBL Nucleotide Sequence Database.

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