Dataset Information

CRED: A Deep Residual Network of Convolutional and Recurrent Units for Earthquake Signal Detection.

ABSTRACT: Earthquake signal detection is at the core of observational seismology. A good detection algorithm should be sensitive to small and weak events with a variety of waveform shapes, robust to background noise and non-earthquake signals, and efficient for processing large data volumes. Here, we introduce the Cnn-Rnn Earthquake Detector (CRED), a detector based on deep neural networks. CRED uses a combination of convolutional layers and bi-directional long-short-term memory units in a residual structure. It learns the time-frequency characteristics of the dominant phases in an earthquake signal from three component data recorded on individual stations. We train the network using 500,000 seismograms (250k associated with tectonic earthquakes and 250k identified as noise) recorded in Northern California. The robustness of the trained model with respect to the noise level and non-earthquake signals is shown by applying it to a set of semi-synthetic signals. We also apply the model to one month of continuous data recorded at Central Arkansas to demonstrate its efficiency, generalization, and sensitivity. Our model is able to detect more than 800 microearthquakes as small as -1.3?ML induced during hydraulic fracturing far away than the training region. We compare the performance of the model with the STA/LTA, template matching, and FAST algorithms. Our results indicate an efficient and reliable performance of CRED. This framework holds great promise for lowering the detection threshold while minimizing false positive detection rates.

SUBMITTER: Mousavi SM

PROVIDER: S-EPMC6635521 | biostudies-literature | 2019 Jul

REPOSITORIES: biostudies-literature

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Publications

CRED: A Deep Residual Network of Convolutional and Recurrent Units for Earthquake Signal Detection.

Mousavi S Mostafa SM Zhu Weiqiang W Sheng Yixiao Y Beroza Gregory C GC

Scientific reports 20190716 1

Earthquake signal detection is at the core of observational seismology. A good detection algorithm should be sensitive to small and weak events with a variety of waveform shapes, robust to background noise and non-earthquake signals, and efficient for processing large data volumes. Here, we introduce the Cnn-Rnn Earthquake Detector (CRED), a detector based on deep neural networks. CRED uses a combination of convolutional layers and bi-directional long-short-term memory units in a residual struct ...[more]

PMID: 31311942

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Project description:BackgroundDriven by deep learning, inter-residue contact/distance prediction has been significantly improved and substantially enhanced ab initio protein structure prediction. Currently, most of the distance prediction methods classify inter-residue distances into multiple distance intervals instead of directly predicting real-value distances. The output of the former has to be converted into real-value distances to be used in tertiary structure prediction.ResultsTo explore the potentials of predicting real-value inter-residue distances, we develop a multi-task deep learning distance predictor (DeepDist) based on new residual convolutional network architectures to simultaneously predict real-value inter-residue distances and classify them into multiple distance intervals. Tested on 43 CASP13 hard domains, DeepDist achieves comparable performance in real-value distance prediction and multi-class distance prediction. The average mean square error (MSE) of DeepDist's real-value distance prediction is 0.896 Å2 when filtering out the predicted distance ≥ 16 Å, which is lower than 1.003 Å2 of DeepDist's multi-class distance prediction. When distance predictions are converted into contact predictions at 8 Å threshold (the standard threshold in the field), the precision of top L/5 and L/2 contact predictions of DeepDist's multi-class distance prediction is 79.3% and 66.1%, respectively, higher than 78.6% and 64.5% of its real-value distance prediction and the best results in the CASP13 experiment.ConclusionsDeepDist can predict inter-residue distances well and improve binary contact prediction over the existing state-of-the-art methods. Moreover, the predicted real-value distances can be directly used to reconstruct protein tertiary structures better than multi-class distance predictions due to the lower MSE. Finally, we demonstrate that predicting the real-value distance map and multi-class distance map at the same time performs better than predicting real-value distances alone.

Dataset Information

CRED: A Deep Residual Network of Convolutional and Recurrent Units for Earthquake Signal Detection.

Publications

CRED: A Deep Residual Network of Convolutional and Recurrent Units for Earthquake Signal Detection.

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