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Understanding hydrogen-bonding structures of molecular crystals via electron and NMR nanocrystallography.


ABSTRACT: Understanding hydrogen-bonding networks in nanocrystals and microcrystals that are too small for X-ray diffractometry is a challenge. Although electron diffraction (ED) or electron 3D crystallography are applicable to determining the structures of such nanocrystals owing to their strong scattering power, these techniques still lead to ambiguities in the hydrogen atom positions and misassignments of atoms with similar atomic numbers such as carbon, nitrogen, and oxygen. Here, we propose a technique combining ED, solid-state NMR (SSNMR), and first-principles quantum calculations to overcome these limitations. The rotational ED method is first used to determine the positions of the non-hydrogen atoms, and SSNMR is then applied to ascertain the hydrogen atom positions and assign the carbon, nitrogen, and oxygen atoms via the NMR signals for 1H, 13C, 14N, and 15N with the aid of quantum computations. This approach elucidates the hydrogen-bonding networks in L-histidine and cimetidine form B whose structure was previously unknown.

SUBMITTER: Guzman-Afonso C 

PROVIDER: S-EPMC6684599 | biostudies-literature | 2019 Aug

REPOSITORIES: biostudies-literature

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Understanding hydrogen-bonding structures of molecular crystals via electron and NMR nanocrystallography.

Guzmán-Afonso Candelaria C   Hong You-Lee YL   Colaux Henri H   Iijima Hirofumi H   Saitow Akihiro A   Fukumura Takuma T   Aoyama Yoshitaka Y   Motoki Souhei S   Oikawa Tetsuo T   Yamazaki Toshio T   Yonekura Koji K   Nishiyama Yusuke Y  

Nature communications 20190806 1


Understanding hydrogen-bonding networks in nanocrystals and microcrystals that are too small for X-ray diffractometry is a challenge. Although electron diffraction (ED) or electron 3D crystallography are applicable to determining the structures of such nanocrystals owing to their strong scattering power, these techniques still lead to ambiguities in the hydrogen atom positions and misassignments of atoms with similar atomic numbers such as carbon, nitrogen, and oxygen. Here, we propose a techniq  ...[more]

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