Large scale evaluation of differences between network-based and pairwise sequence-alignment-based methods of dendrogram reconstruction.
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ABSTRACT:
SUBMITTER: Gamermann D
PROVIDER: S-EPMC6728023 | biostudies-literature | 2019
REPOSITORIES: biostudies-literature
Publications
Large scale evaluation of differences between network-based and pairwise sequence-alignment-based methods of dendrogram reconstruction.
Gamermann Daniel D Montagud Arnau A Conejero J Alberto JA Fernández de Córdoba Pedro P Urchueguía Javier F JF
PloS one 20190905 9
Dendrograms are a way to represent relationships between organisms. Nowadays, these are inferred based on the comparison of genes or protein sequences by taking into account their differences and similarities. The genetic material of choice for the sequence alignments (all the genes or sets of genes) results in distinct inferred dendrograms. In this work, we evaluate differences between dendrograms reconstructed with different methodologies and for different sets of organisms chosen at random fr ...[more]
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