Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Complete Genome Sequence of Stenotrophomonas maltophilia Podophage Ponderosa.

ABSTRACT: Stenotrophomonas maltophilia is a Gram-negative bacterium that is emerging as a multidrug-resistant global opportunistic pathogen. Here, we describe the genome of the T7-like S. maltophilia podophage Ponderosa, with 54 predicted protein-coding genes and a 493-bp terminal repeat.

SUBMITTER: Marquez A

PROVIDER: S-EPMC6763655 | biostudies-literature | 2019 Sep

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Complete Genome Sequence of Stenotrophomonas maltophilia Podophage Ponderosa.

Marquez Alejandra A Newkirk Heather H Moreland Russell R Gonzalez Carlos F CF Liu Mei M Ramsey Jolene J

Microbiology resource announcements 20190926 39

<i>Stenotrophomonas maltophilia</i> is a Gram-negative bacterium that is emerging as a multidrug-resistant global opportunistic pathogen. Here, we describe the genome of the T7-like <i>S. maltophilia</i> podophage Ponderosa, with 54 predicted protein-coding genes and a 493-bp terminal repeat. ...[more]

PMID: 31558640

Similar Datasets

Complete Genome Sequence of Stenotrophomonas maltophilia Podophage Paxi.

Project description:Stenotrophomonas maltophilia is a multidrug-resistant nosocomial pathogen that can cause life-threatening infections among immunocompromised populations. This report presents the complete 74,962-bp genome of S. maltophilia podophage Paxi, an N4-like phage sharing 85.3% nucleotide similarity to S. maltophilia podophage Pokken.

| S-EPMC9022576 | biostudies-literature

Complete Genome Sequence of Stenotrophomonas maltophilia Podophage Piffle.

Project description:Stenotrophomonas maltophilia is an emerging multidrug-resistant opportunistic human pathogen causing various nosocomial infections. Here, we characterize the genome of S. maltophilia podophage Piffle. Its 76,332-bp genome is most closely related to the N4-like S. maltophilia podophage Pokken, with over 86% genome-wide nucleotide identity and 84 shared proteins.

| S-EPMC9022547 | biostudies-literature

Complete Genome Sequence of Stenotrophomonas maltophilia Myophage Moby.

Project description:Stenotrophomonas maltophilia is a prevalent nosocomial pathogen with multidrug resistance. Here, we describe the complete genome of S. maltophilia myophage Moby, which shares characteristics with Enterobacteria phage T4 and is closely related to Stenotrophomonas phage IME-SM1. Moby has a 159,365-bp genome with 271 predicted protein-coding genes and 24 predicted tRNAs.

| S-EPMC6940310 | biostudies-literature

Complete Genome Sequence of Stenotrophomonas maltophilia Siphophage Suso.

Project description:Phage Suso is a temperate siphophage of Stenotrophomonas maltophilia with a 44,659-bp genome. This phage is closely related to Stenotrophomonas phage SM171, sharing 92% overall nucleotide identity as determined by BLASTn, and it shares 14 similar proteins (BLASTp, E value < 0.001) with some Pseudomonas phages from the genus Beetrevirus.

| S-EPMC9022531 | biostudies-literature

Complete Genome Sequence of Stenotrophomonas maltophilia Siphophage Siara.

Project description:Stenotrophomonas maltophilia is associated with an increasing incidence of nosocomial infections. Here, we describe the isolation and genome annotation of S. maltophilia siphophage Siara. Its 61,427-bp genome is currently related only to one phage in the NCBI database, namely, S. maltophilia phage Salva, and is not related to any prophages.

| S-EPMC9119069 | biostudies-literature

Complete Genome Sequence of Stenotrophomonas maltophilia Phage Philippe.

Project description:Stenotrophomonas maltophilia is emerging as an opportunistic multidrug-resistant pathogen. S. maltophilia podophage Philippe has a 74,717-bp genome which is related broadly to the N4-like phage group, including Stenotrophomonas phage Pokken. The low sequence identity to other described phages suggests that Philippe is an unclassified member of the N4-like subfamily Rothmandenesvirinae.

| S-EPMC9202365 | biostudies-literature

Complete Genome Sequence of Stenotrophomonas maltophilia Siphophage Sonora.

Project description:Phage Sonora is a siphophage that was isolated against the opportunistic human pathogen Stenotrophomonas maltophilia. The genome of phage Sonora is 63,825 bp long and is not related to that of any phage at the nucleotide level. Sonora shares 46 of 97 total proteins with the Bordetella phages CN2, MW2, and FP1.

| S-EPMC9022593 | biostudies-literature

Complete Genome Sequence of Stenotrophomonas maltophilia Siphophage Summit.

Project description:Stenotrophomonas maltophilia is an opportunistic pathogen exhibiting resistance to multiple antimicrobials. This study reports the complete genome of an S. maltophilia siphophage, Summit. Its genome of 95,728 bp has 148 protein-coding genes and 5 tRNAs, including 1 predicted suppressor tRNA. Possible target genes for the suppressor tRNA are not identified.

| S-EPMC9022506 | biostudies-literature

Complete Genome Sequence of Stenotrophomonas maltophilia Myophage Marzo.

Project description:Stenotrophomonas maltophilia is a Gram-negative opportunistic bacterium that is increasingly being associated with infections. Here, we report the complete genome of the S. maltophilia myophage Marzo, with a 159,384-bp genome encoding 268 proteins, 23 tRNAs, and 1 transfer-messenger RNA. Marzo is closely related to S. maltophilia phages IME-SM1 and Mendera.

| S-EPMC8928761 | biostudies-literature

Complete Genome Sequence of Stenotrophomonas maltophilia Siphophage Salva.

Project description:Stenotrophomonas maltophilia is a Gram-negative pathogen causing severe and often refractory illnesses such as pneumonia and bacteremia. We present the genome of phage Salva, a novel S. maltophilia phage that is not closely related to any phages currently deposited in GenBank. The genome is 60,789 bp, containing 102 putative protein-coding genes.

| S-EPMC7953286 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data