A cognitive style dataset including functional near-infrared spectroscopy, eye-tracking, psychometric and behavioral measures.
Ontology highlight
ABSTRACT:
SUBMITTER: Bendall RCA
PROVIDER: S-EPMC6811964 | biostudies-literature |
REPOSITORIES: biostudies-literature
Similar Datasets
Project description:The term "hyperscanning" refers to the simultaneous recording of multiple individuals' brain activity. As a methodology, hyperscanning allows the investigation of brain-to-brain synchrony. Despite being a promising technique, there is a limited number of publicly available functional Near-infrared Spectroscopy (fNIRS) hyperscanning recordings. In this paper, we report a dataset of fNIRS recordings from the prefrontal cortical (PFC) activity of 33 mother-child dyads and 29 father-child dyads. Data was recorded while the parent-child dyads participated in an experiment with two sessions: a passive video attention task and a free play session. Dyadic metadata, parental psychological traits, behavioural annotations of the play sessions and information about the video stimuli complementing the dataset of fNIRS signals are described. The dataset presented here can be used to design, implement, and test novel fNIRS analysis techniques, new hyperscanning analysis tools, as well as investigate the PFC activity in participants of different ages when they engage in passive viewing tasks and active interactive tasks.
| S-EPMC9569382 | biostudies-literature
Project description:Near-infrared spectroscopy (NIRS)-derived measures of tissue oxygen saturation (StO2) have been recently shown to significantly correlate with the widely used method for noninvasively assessing vascular endothelial function, flow-mediated dilation (FMD). The purpose of this study was to examine the intraday and interday reliability of the reperfusion slope of StO2 (slope 2 StO2) and compare it to FMD Ultrasound-derived FMD was quantified following 5 min of distal cuff occlusion of the popliteal artery in nine healthy young men (26 ± 3 years). An FMD test was performed each of 4 days, with a fifth involving three tests. FMD was calculated as the greatest percent change in diameter from baseline (%FMD). StO2 was measured using NIRS throughout each test, with slope 2 StO2 being calculated as the upslope of 10-sec following cuff release. Reliability was determined using repeatability, intraclass correlation coefficients (ICC), and coefficient of variation (CV). Repeatability of slope 2 StO2 was better than %FMD for both intraday (0.43 and 5.65, respectively) and interday (0.48 and 4.82, respectively) comparisons; approximately 30% of mean values for slope 2 StO2 could be attributed to measurement error, whereas 100% of mean FMD could be for both intraday and interday comparisons. Similarly, ICC and CV values indicated stronger reliability of slope 2 StO2 compared to %FMD for both intraday (ICC 0.92 and 0.36, respectively; CV 9 ± 4% and 44 ± 24%, respectively) and interday (ICC 0.94 and 0.25, respectively; CV 14 ± 5% and 40 ± 22%, respectively) comparisons. In conclusion, NIRS-derived slope 2 StO2 can be used as a reliable measure of vascular reactivity.
| S-EPMC4873629 | biostudies-other
Project description:In the dataset presented in this article, 168 rice samples comprising sixteen rice varieties (including Indica and Japonica sub species) from a Portuguese Rice Breeding Program obtained from three different sites along four seasons, and 11 standard rice varieties from International Rice Research Institute were characterised. The amylose concentration was evaluated based on iodine method, and the near infrared (NIR) spectra were determined. To assess the advantage of Near infrared spectroscopy, different rice varieties and specific algorithms based on Matlab software such as Standard Normal Variate (SNV), Multiple Scatter Calibration (MSC) and Savitzky-Golay filter were used for NIR spectra pre-processing.
| S-EPMC5712058 | biostudies-literature
Project description:Organic wastes originating from livestock, agro-industry or urban activities may represent true resources when recycled for new uses, for example, as soil improvers, organic fertilizers or bioenergy sources. The compositional characteristics of these organic resources (ORs) can vary considerably depending on origin, nature, processing, stage, and state. Despite being of potential interest to different stakeholders in a circular economy, the variability in OR characteristics and the difficulty of accessing reliable, fast and inexpensive analysis methods may curb the recycling of OR in the agriculture or bioenergy sectors. As is the case in other low-income countries, scarcity of data on OR characteristics and the difficulty in assessing these data (due to cost and the sparsity of laboratories) is particularly acute in Madagascar, thus impairing the rational utilization of OR in the agricultural or bioenergy sectors. Visible-near infrared spectroscopy (VIS-NIR) has proven to be suitable for the fast, reliable and low-cost determination of the composition of different ORs, usually through the development of calibration models based on one type of OR by single research or lab groups. It is challenging to develop VIS-NIR models based on several types of ORs encompassing a wide range of target characteristics. Another challenging issue is the extension of databases containing spectra acquired on different spectrometers to increase model genericity. In both cases, standardization can be performed to resolve the problem of developing models for diverse ORs whose spectra originate from different laboratories. To assess the ability to develop VIS-NIR models with as much genericity as possible, we built a large database containing a wide diversity of ORs produced in Madagascar. The data presented in this paper were obtained by chemical and spectral analyses of 1,000 ORs collected from five districts in Madagascar. The data are accompanied by fine-grained metadata defined by 32 descriptors of ORs, including origin (animal, agro-industrial, and urban); nature (manure, agro-industrial waste, and compost); farm type (smallholder and agricultural factory); exploitation type (smallholder farm, factory farm, on-farm compost facility, and town compost facility); diversity of animal feed, litter, sex, and age; and diversity of bedding material. The chemical properties (including the organic nitrogen, organic carbon, organic matter, inorganic matter, phosphorus, potassium, calcium, magnesium, zinc, copper, nickel, chromium, cadmium, and lead and soluble, hemicellulose, cellulose, lignin and cutin fractions) were analyzed following laboratory standards. The number of analyses performed ranged from 39 to 180 depending on the chemical property. VIS-NIR spectra were acquired using a Labspec spectrometer. To facilitate the merging of spectral data or the development of VIS-NIR models based on broad datasets, the spectra were presented in raw form and after standardization. The dataset is original in terms of sources and width. This dataset should be of particular interest to chemometricians, biogeochemists, agronomists, energy planners, hygienists and other professionals involved in recycling ORs for various new purposes in low-income countries and elsewhere.
| S-EPMC9194856 | biostudies-literature
Project description:In the dataset presented in this article, 36 sludge samples were characterized. Rheological parameters were determined and near infrared spectroscopy measurements were realized. In order to assess the potential of near infrared spectroscopy to predict rheological parameters of sludge, Partial Least Square algorithm was used to build calibration models.
| S-EPMC5040641 | biostudies-literature
Project description:In diffuse optics, quantitative assessment of the human brain is confounded by the skull and scalp. To better understand these superficial tissues, we advance interferometric near-infrared spectroscopy (iNIRS) to form images of the human superficial forehead blood flow index (BFI). We present a null source-collector (S-C) polarization splitting approach that enables galvanometer scanning and eliminates unwanted backscattered light. Images show an order-of-magnitude heterogeneity in superficial dynamics, implying an order-of-magnitude heterogeneity in brain specificity, depending on forehead location. Along the time-of-flight dimension, autocorrelation decay rates support a three-layer model with increasing BFI from the skull to the scalp to the brain. By accurately characterizing superficial tissues, this approach can help improve specificity for the human brain.
| S-EPMC9281567 | biostudies-literature
Project description:Combined with multivariate calibration methods, near-infrared (NIR) spectroscopy is a non-destructive, rapid, precise and inexpensive analytical method to predict chemical contents of organic products. Nevertheless, one practical limitation of this approach is that performance of the calibration model may decrease when the data are acquired with different spectrometers. To overcome this limitation, standardization methods exist, such as the piecewise direct standardization (PDS) algorithm. The dataset presented in this article consists of 332 manure samples from poultry and cattle, sampled from farms located in major regions of livestock production in mainland France and Reunion Island. The samples were analysed for seven chemical properties following conventional laboratory methods. NIR spectra were acquired with three spectrometers from fresh homogenized and dried ground samples and then standardized using the PDS algorithm. This important dataset can be used to train and test chemometric models and is of particular interest to NIR spectroscopists and agronomists who assess the agronomic value of animal waste.
| S-EPMC7749372 | biostudies-literature
Project description:IntroductionEye Movement Desensitization and Reprocessing (EMDR) is a psychotherapeutic treatment resolving emotional distress caused by traumatic events. With EMDR, information processing is facilitated by eye movements (EM) during the recall of a traumatic memory (RECALL). The aim of this study is to investigate the effects of ocular movements of EMDR on the hemodynamics of the prefrontal cortex (PFC).Material and methodsTwo groups were recruited: a trial group (wEM) received a complete EMDR treatment, whereas a control group (woEM) received a therapy without EM. PFC hemodynamics was monitored by near-infrared spectroscopy during RECALL and during focusing on the worst image of the trauma (pre-RECALL). The parameters of oxy- (oxy-Hb), and deoxy-hemoglobin (deoxy-Hb) were acquired and analyzed in time domain, by calculating the slope within pre-RECALL and RECALL periods, and in the frequency domain, by calculating the mean power of oxy-Hb and deoxy-Hb in the very-low frequency (VLF, 20-40 mHz) and low frequency (LF, 40-140 mHz) bandwidths. We compared pre-RECALL with RECALL periods within subjects, and pre-RECALL and RECALL parameters of wEM with the corresponding of woEM.ResultsAn effect of group on mean slope of oxy-Hb and deoxy-Hb in pre-RECALL and oxy-Hb in RECALL periods was observed. wEM showed a lower percentage of positive angular coefficients during pre-RECALL with respect to RECALL, on the opposite of woEM. In the frequency domain, wEM had significant difference in oxy-Hb and deoxy-Hb LF of left hemisphere, whereas woEM showed no difference.Discussion and conclusionWe observed the effect of EM on PFC oxygenation during EMDR, since wEM subjects showed a mean increase of oxy-Hb during RECALL and a decrease during pre-RECALL, as opposed to woEM. Frequency analysis evidenced a reduction of activity of sympathetic nervous system in wEM group during pre-RECALL. Our outcomes revealed a different hemodynamics induced by eye movements in wEM with respect to woEM group.
| S-EPMC5081184 | biostudies-literature
Project description:Pupil tracking data are collected through the use of an infrared camera, and a head-mounted system [1]. The head-mounted system detects the relative pupil position and adjusts the mouse cursor position accordingly. The data are available for comparison of eye tracking with saccadic movements (with the head fixed in space) versus those from smooth movements (with the head moving in space). The analysis comprises two experiments for both types of eye tracking, which are performed with ten trials each for two participants. In the first experiment, the participant attempts to place the cursor into a target boundary of varying sizes. In the second experiment, the participant attempts to move the cursor to a target location within the shortest time.
| S-EPMC7817423 | biostudies-literature
Project description:Near-infrared spectroscopy (NiRS) is a relatively new technology of brain imaging with its potential in the assessment of cerebrovascular health only recently discovered. Encouraging early results suggest that NiRS can be used as an inexpensive and portable cerebrovascular health tracking device using a recently proposed pulse relaxation function (PReFx). In this paper, we propose a new NiRS timing index, [Formula: see text], of cerebrovascular health. [Formula: see text] is a novel use of the NiRS technology. [Formula: see text] is motivated by the previously proved relationship of the timing of the reflected wave with vascular resistance and compliance in the context of pressure waveforms. We correlated both [Formula: see text] and PReFx against age, a non-exercise cardiorespiratory fitness (CRF) index, and two existing indices of cerebrovascular health, namely transcranial Doppler (TCD) augmentation index, [Formula: see text], and magnetic resonance imaging (MRI) blood flow pulsatility index, [Formula: see text]. The [Formula: see text] correlations with Age, CRF, [Formula: see text] and [Formula: see text] all are significant, i.e., [Formula: see text] ([Formula: see text]), [Formula: see text] ([Formula: see text]), [Formula: see text] ([Formula: see text]) and [Formula: see text] ([Formula: see text]), respectively. PReFx, however, did not have significant correlations with any of the vascular health factors. The proposed timing index is a reliable indicator of cerebrovascular aging factors in the NiRS waveform.
| S-EPMC8292377 | biostudies-literature